Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AL162388.1-201ENST00000450912 352 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC234781.3-201ENST00000452540 973 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 ISCUP1-201ENST00000454451 448 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 IGLV2-34-201ENST00000490007 283 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 MTATP6P1-201ENST00000514057 681 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC233266.2-201ENST00000567067 528 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 BMS1P7-201ENST00000602440 1052 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 MEMO1P5-201ENST00000604810 406 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC126915.2-201ENST00000610957 190 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC245389.2-201ENST00000616023 576 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AL645927.2-201ENST00000618350 349 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC242843.1-201ENST00000618702 573 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MIR323A-201ENST00000362199 86 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RNA5SP307-201ENST00000362863 116 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MIR620-201ENST00000385232 95 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RNU1-82P-201ENST00000390851 165 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 U3.30-201ENST00000391308 210 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 JKAMPP1-201ENST00000413804 919 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 BMS1P13-201ENST00000417301 885 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 SEC63P1-201ENST00000425785 1258 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 YWHAEP5-201ENST00000431545 765 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MRPL50P1-201ENST00000431951 384 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL512661.1-201ENST00000434586 1253 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RPS5P7-201ENST00000456664 608 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 OR2AO1P-201ENST00000476497 403 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 LARP7P4-201ENST00000481075 878 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RN7SL205P-201ENST00000490174 284 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC002456.2-201ENST00000509356 380 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 snoU109.6-201ENST00000516831 118 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RNU6-334P-201ENST00000517072 102 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC068339.2-201ENST00000534395 618 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MIR4443-201ENST00000585052 53 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL391001.1-201ENST00000602747 715 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC103792.1-201ENST00000603591 919 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL391358.1-201ENST00000605342 190 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AC005021.1-201ENST00000608730 355 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL096803.3-201ENST00000609032 532 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MIR1264-201ENST00000616374 69 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 AL442639.1-201ENST00000625030 1899 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 NXPH1-205ENST00000602349 1953 ntBASIC4.38□□□□□ -1.71
NDE1Q9NXR1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDE1Q9NXR1 MAPK10-263ENST00000641052 4307 ntBASIC4.37□□□□□ -1.71
NDE1Q9NXR1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NDE1Q9NXR1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms