Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 NRBF2P2-201ENST00000413087 861 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC011998.1-201ENST00000433403 117 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 IFNWP4-201ENST00000453148 294 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 RPS29P33-201ENST00000456717 146 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 PPIAP21-201ENST00000464473 501 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 RPS29P22-201ENST00000472363 168 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC037198.2-201ENST00000478845 733 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AP001960.1-201ENST00000506494 658 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC123786.2-201ENST00000603459 275 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC017076.1-201ENST00000607613 578 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC116651.1-201ENST00000609724 556 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC008785.1-201ENST00000624475 456 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC009229.4-201ENST00000623854 1947 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 A2MP1-204ENST00000566278 4130 ntBASIC4.26□□□□□ -1.73
TREX1Q9NSU2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TREX1Q9NSU2 AL445437.1-201ENST00000623157 3087 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AL049555.1-201ENST00000562834 1933 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC010132.2-201ENST00000295493 1043 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 RN7SKP235-201ENST00000410662 305 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 MFSD13B-201ENST00000420133 1290 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 CNOT7P1-201ENST00000429006 852 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 RPS29P17-201ENST00000430795 166 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 RPL7P32-201ENST00000457119 744 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 RPL23AP24-201ENST00000458203 385 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 PARP4P3-201ENST00000510265 317 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC018552.3-201ENST00000567416 561 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 ELOCP28-201ENST00000590044 317 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 FAM27D1-201ENST00000612308 341 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC116447.1-201ENST00000613153 453 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC114546.3-201ENST00000623582 1734 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AC123912.3-201ENST00000600907 1367 ntBASIC4.25□□□□□ -1.73
TREX1Q9NSU2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.25□□□□□ -1.73
TREX1Q9NSU2 AL158163.1-201ENST00000603915 1649 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC011266.1-201ENST00000624119 3569 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 RNU1-14P-201ENST00000362759 152 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AL607077.1-201ENST00000401718 499 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms