Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC061975.8-201ENST00000587058 721 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC005084.1-201ENST00000605160 304 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC099494.2-201ENST00000623371 978 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC026422.1-201ENST00000623961 452 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AC011447.7-201ENST00000624228 1590 ntBASIC5.24□□□□□ -1.57
USP29Q9HBJ7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP29Q9HBJ7 AL672167.1-204ENST00000641875 3017 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ZNF652P1-201ENST00000442420 1309 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 RNU4-92P-201ENST00000363783 136 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 RNU6-224P-201ENST00000384055 107 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 SNORD116-2-201ENST00000384274 95 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 SNORD116-6-201ENST00000384711 96 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MIR600-201ENST00000385007 98 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL359643.1-201ENST00000404109 423 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL356320.2-201ENST00000417263 507 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 C1DP1-201ENST00000426049 402 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 TXNL1P1-201ENST00000429528 554 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 BX323845.1-201ENST00000432417 179 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MTCO1P52-201ENST00000433928 531 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 H2AFZP6-201ENST00000444403 394 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC092685.1-201ENST00000447960 1243 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 OR4A2P-201ENST00000527276 913 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ZNF321P-202ENST00000550843 495 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC011840.5-201ENST00000582125 771 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL049844.2-201ENST00000604280 628 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL139344.1-201ENST00000605228 195 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL356274.1-201ENST00000617064 410 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC074140.1-201ENST00000621617 208 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC021106.3-201ENST00000623925 531 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC063976.2-201ENST00000425667 3556 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AL606537.1-201ENST00000607258 2011 ntBASIC5.23□□□□□ -1.57
USP29Q9HBJ7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP29Q9HBJ7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 METTL21EP-201ENST00000298105 713 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 RN7SKP103-201ENST00000363848 320 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 Y_RNA.578-201ENST00000390903 88 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 DNAJC19P6-201ENST00000401853 280 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms