Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC007394.1-201ENST00000421941 531 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL356806.1-201ENST00000422524 916 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL138785.1-201ENST00000425821 331 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 USP9YP9-201ENST00000429406 715 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RPL23AP43-201ENST00000446445 471 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RPL23AP12-201ENST00000467573 473 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC007423.1-201ENST00000605009 627 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL133243.1-201ENST00000614487 366 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL023881.1-201ENST00000621088 301 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AC007546.2-201ENST00000623996 360 ntBASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
LRRC40Q9H9A6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 OR10J6P-201ENST00000289731 930 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 SNORD113.2-201ENST00000364166 89 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 MIR421-201ENST00000365696 85 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 SNORA70F-201ENST00000384142 135 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 RNU6-31P-201ENST00000384388 108 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 MIR659-201ENST00000384963 97 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 RN7SKP216-201ENST00000411050 312 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 XKRYP6-201ENST00000440468 1116 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 XKRYP3-201ENST00000442113 1116 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 CEACAMP6-201ENST00000452007 574 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 RN7SL610P-201ENST00000463845 291 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC008694.2-201ENST00000517591 306 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AP001781.1-201ENST00000530977 207 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 GLRXP2-201ENST00000555594 321 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 MIR4480-201ENST00000582492 71 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AL049844.2-201ENST00000604280 628 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AL138721.1-201ENST00000616756 179 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC000123.2-201ENST00000623124 461 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRC40Q9H9A6 AC017104.4-201ENST00000636283 1592 ntBASIC4.53□□□□□ -1.69
LRRC40Q9H9A6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 MIR7-1-201ENST00000384871 110 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AL035419.1-201ENST00000397037 564 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AL133270.1-201ENST00000402635 279 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 RPL31P52-201ENST00000407532 367 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AP001324.1-201ENST00000428553 399 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 HMGB3P21-201ENST00000452483 547 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 RNU6-491P-201ENST00000516099 110 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC104997.1-201ENST00000519761 717 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC068790.7-201ENST00000602347 528 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC023509.5-201ENST00000617434 807 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 CFTRP2-201ENST00000634304 199 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms