Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SNED1Q8TER0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNED1Q8TER0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC083899.2-201ENST00000423285 1376 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC105074.1-201ENST00000623380 3095 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC069157.1-201ENST00000421749 137 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 MTATP6P11-201ENST00000428071 670 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 RPL23AP83-201ENST00000434984 473 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 DDX39BP2-208ENST00000453923 258 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 RPL23AP81-201ENST00000455252 467 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 OR52A4P-202ENST00000481634 799 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC012123.2-201ENST00000485809 248 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC104164.2-201ENST00000496953 495 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 OR52A4P-203ENST00000498233 1014 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 TRMT10BP1-201ENST00000519377 943 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC008676.3-201ENST00000521237 435 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC005972.3-201ENST00000606304 481 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC099669.2-201ENST00000616549 437 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC015871.5-202ENST00000623252 701 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AP003072.5-201ENST00000623872 773 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC097461.1-201ENST00000568928 2821 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 AC112198.2-201ENST00000426589 6996 ntBASIC5.19□□□□□ -1.58
SNED1Q8TER0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNED1Q8TER0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 CASC19-261ENST00000641853 1638 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 OR11H4-201ENST00000315409 1082 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 RNA5SP175-201ENST00000364275 119 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 GOT2P5-201ENST00000433995 546 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AL445433.1-201ENST00000457507 257 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 DSTNP2-201ENST00000504533 515 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC115989.2-201ENST00000578640 563 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 RPL21P136-201ENST00000605378 396 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 SNORA51-201ENST00000606420 132 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC012467.1-201ENST00000607740 256 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC073592.7-201ENST00000623659 507 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC007546.2-201ENST00000623996 360 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC020923.1-201ENST00000624021 917 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AL672167.1-203ENST00000641299 2975 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 AL133268.1-201ENST00000405676 1401 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 AL672167.1-205ENST00000641112 3080 ntBASIC5.18□□□□□ -1.58
SNED1Q8TER0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNED1Q8TER0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.18□□□□□ -1.58
SNED1Q8TER0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AL589826.1-201ENST00000340697 249 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNED1Q8TER0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC009237.5-201ENST00000414271 501 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC108032.1-201ENST00000416706 207 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.17□□□□□ -1.58
SNED1Q8TER0 NANOGP10-201ENST00000453325 895 ntBASIC5.17□□□□□ -1.58
SNED1Q8TER0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms