Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TMX2P1-201ENST00000436507 708 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 MIR5195-201ENST00000583555 115 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 OR7M1P-201ENST00000608946 533 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 AC097461.1-201ENST00000568928 2821 ntBASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
ALMS1Q8TCU4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 RNU6-213P-201ENST00000384051 104 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 RN7SKP167-201ENST00000411047 285 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AL159987.2-201ENST00000432754 307 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AP000942.1-201ENST00000463969 747 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 MIMT1-201ENST00000597105 1050 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AL031985.2-201ENST00000600955 480 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SRGNP1-201ENST00000603392 451 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AL121890.2-201ENST00000617644 465 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC015722.2-201ENST00000622210 551 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC005858.4-201ENST00000623191 700 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 ZNF833P-201ENST00000424938 1494 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 PCNPP4-201ENST00000414817 517 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC104333.2-201ENST00000422630 192 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 MRPL48P1-201ENST00000445390 636 ntBASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.84□□□□□ -1.95
ALMS1Q8TCU4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 FAM91A3P-201ENST00000456826 2544 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 SYF2P2-201ENST00000417620 583 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 OR9M1P-201ENST00000459641 921 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AC006499.5-201ENST00000505037 514 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AC026427.2-201ENST00000506228 536 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 NDUFA5P2-201ENST00000519723 344 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AC127024.5-201ENST00000580085 462 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 AL138721.1-201ENST00000616756 179 ntBASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC2.84□□□□□ -1.96
ALMS1Q8TCU4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC236972.1-201ENST00000433225 199 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC012671.1-201ENST00000451912 203 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 SETP14-201ENST00000497538 873 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 MTND4LP31-201ENST00000514859 294 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 NACAP7-201ENST00000407371 609 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms