Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 SNORA62.2-201ENST00000364672 152 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 MIR3074-201ENST00000384885 81 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 RN7SKP177-201ENST00000410567 355 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL160275.2-201ENST00000412010 394 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL590762.4-201ENST00000425885 253 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL049745.1-201ENST00000433953 286 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 MAPRE1P3-201ENST00000435438 796 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 RN7SL610P-201ENST00000463845 291 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC010469.1-201ENST00000463864 576 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC008897.1-201ENST00000494006 347 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC005912.1-201ENST00000495392 255 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC007424.1-203ENST00000554613 687 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 FAM25E-202ENST00000608562 189 ntBASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLHC1Q8NHS4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 MIR298-201ENST00000401212 88 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RPL31P52-201ENST00000407532 367 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 VN1R8P-201ENST00000407739 893 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RN7SKP222-201ENST00000410651 315 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AC073335.1-201ENST00000427776 363 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RN7SL354P-201ENST00000469282 294 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 PCNPP1-201ENST00000552501 511 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL352979.3-201ENST00000553515 247 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL669942.2-201ENST00000620352 697 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AP000843.1-201ENST00000624880 701 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.23□□□□□ -1.73
CLHC1Q8NHS4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 AC068254.2-201ENST00000623938 3577 ntBASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.22□□□□□ -1.73
CLHC1Q8NHS4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms