Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC105224.1-201ENST00000587055 421 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC079684.1-201ENST00000621405 437 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 HSPA8P14-201ENST00000552265 1805 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.64□□□□□ -1.35
DEPDC4Q8N2C3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LCOR-201ENST00000286067 4542 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RPL12P13-201ENST00000310055 497 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RNA5SP378-201ENST00000363646 120 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 Y_RNA.184-201ENST00000363884 108 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 Y_RNA.422-201ENST00000384054 114 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SNORA51.7-201ENST00000384171 134 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL591416.1-201ENST00000404015 867 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RPL36AP36-201ENST00000418616 301 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 GRPEL2P2-201ENST00000421856 670 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 EEF1GP7-201ENST00000422983 703 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL121916.1-201ENST00000429405 308 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC244505.2-201ENST00000435089 759 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC104837.1-201ENST00000444644 1587 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SF3A3P1-201ENST00000446317 1477 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL591379.2-201ENST00000450223 397 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RPS14P8-201ENST00000478778 369 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC079944.1-201ENST00000485426 495 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC009153.1-201ENST00000485799 496 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RPL29P23-201ENST00000486188 442 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 KLHL2P1-201ENST00000508691 521 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP13-201ENST00000515933 244 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SNORD27.1-201ENST00000516319 72 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC100823.2-201ENST00000518337 699 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 ST13P6-201ENST00000522430 1102 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC008429.2-201ENST00000523057 864 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 PSMA2P1-201ENST00000526365 646 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL049869.4-201ENST00000555669 178 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 MIR4685-201ENST00000578185 69 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 RPS28P1-201ENST00000604589 187 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL022345.1-201ENST00000607292 135 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC034229.6-201ENST00000623704 224 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AC022743.1-201ENST00000624990 664 ntBASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
DEPDC4Q8N2C3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AL078621.1-201ENST00000272567 768 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 Y_RNA.100-201ENST00000363141 102 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms