Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 NDUFB4P9-201ENST00000511646 388 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RNA5SP92-201ENST00000516437 110 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RN7SKP5-201ENST00000517045 272 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC016180.1-201ENST00000567945 403 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC012146.2-201ENST00000576545 416 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 MIR3667-201ENST00000581025 74 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC083899.3-201ENST00000603413 594 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC023043.4-201ENST00000612081 449 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 MIR6853-201ENST00000619642 74 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 U7.8-201ENST00000619968 63 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC008785.1-201ENST00000624475 456 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AL136964.1-201ENST00000622038 2990 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RPS4XP5-202ENST00000449995 1334 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AL445437.1-201ENST00000623157 3087 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 ERCC6-202ENST00000374127 1782 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RNU4-34P-201ENST00000410431 124 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RN7SKP213-201ENST00000410746 298 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RN7SKP206-201ENST00000410823 293 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 NPM1P26-201ENST00000426339 738 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RBMY2QP-201ENST00000429799 1147 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RPEP2-201ENST00000432149 701 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 UBE2V1P3-201ENST00000439651 417 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RPL23AP93-201ENST00000440847 484 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RPL7P31-201ENST00000450192 724 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 snoU13.20-201ENST00000459180 104 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC005532.2-201ENST00000467154 373 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC087385.1-201ENST00000475062 312 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RN7SL812P-201ENST00000493791 279 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC006499.3-201ENST00000506077 748 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC106872.4-201ENST00000510050 523 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 RNA5SP143-201ENST00000516936 115 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 IGLVIV-64-201ENST00000518581 301 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC073091.2-201ENST00000603205 907 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC123786.2-201ENST00000603459 275 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 Z82195.1-201ENST00000604558 398 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC116447.1-201ENST00000613153 453 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 AC006065.6-201ENST00000625201 545 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 OR5AC4P-202ENST00000642086 985 ntBASIC3.87□□□□□ -1.79
CCDC58Q4VC31 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC58Q4VC31 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AL607077.1-201ENST00000401718 499 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 COX6B1P1-201ENST00000415962 213 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC013268.2-201ENST00000420753 337 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 CEACAMP7-201ENST00000444105 496 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC007537.2-201ENST00000472093 511 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 RPL7P16-201ENST00000479738 738 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 NARSP2-201ENST00000518524 679 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC098935.2-201ENST00000604222 466 ntBASIC3.86□□□□□ -1.79
CCDC58Q4VC31 AC022467.1-201ENST00000614738 749 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms