Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL121972.1-201ENST00000402023 252 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 RN7SKP266-201ENST00000410232 287 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 MRPS21P5-201ENST00000417885 231 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 COX6CP17-201ENST00000421389 185 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC073069.1-201ENST00000428657 441 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 RPL31P35-201ENST00000431058 377 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 OR52B5P-201ENST00000435337 951 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC132479.1-201ENST00000449160 144 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 VN1R38P-201ENST00000450265 887 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AL672138.1-201ENST00000450604 1015 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC131935.1-201ENST00000524621 333 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 CHEK2P2-201ENST00000554701 672 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC027796.1-201ENST00000575593 512 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC233702.7-202ENST00000582941 211 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC090236.2-201ENST00000587933 1101 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC011497.2-201ENST00000600255 639 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AP001429.1-201ENST00000602568 530 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AL161729.3-201ENST00000603533 673 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AL050343.2-201ENST00000607338 280 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC093788.1-201ENST00000609356 927 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH1Q08174 AC021106.3-201ENST00000623925 531 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
PCDH1Q08174 MIR193BHG-214ENST00000641765 509 ntBASIC6.24□□□□□ -1.41
PCDH1Q08174 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH1Q08174 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH1Q08174 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PCDH1Q08174 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC018628.1-201ENST00000624147 3819 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC025125.1-201ENST00000624743 1922 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH1Q08174 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDH1Q08174 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDH1Q08174 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 RNA5SP308-201ENST00000362532 115 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 RNU4-79P-201ENST00000362764 141 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 SNORA70H-201ENST00000383910 135 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 RNU6-767P-201ENST00000384132 107 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 SNORA70J-201ENST00000384182 135 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 SNORA70.9-201ENST00000384370 135 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDH1Q08174 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 RNU6-908P-201ENST00000410160 94 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 RNA5SP251-201ENST00000410614 137 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 RAD23BP1-201ENST00000421404 1227 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC133104.1-201ENST00000429100 218 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH1Q08174 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDH1Q08174 AP003385.3-201ENST00000472498 287 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 RN7SL790P-201ENST00000474043 298 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 PPP1R11P1-201ENST00000486095 376 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH1Q08174 NPM1P27-201ENST00000502784 830 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 NIFKP7-201ENST00000503365 834 ntBASIC6.23□□□□□ -1.41
PCDH1Q08174 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms