Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.29□□□□□ -1.56
UBE3AQ05086 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3AQ05086 PSMA6P4-201ENST00000603247 718 ntBASIC5.29□□□□□ -1.56
UBE3AQ05086 ELOCP34-201ENST00000604436 327 ntBASIC5.29□□□□□ -1.56
UBE3AQ05086 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 AC090772.4-201ENST00000623599 362 ntBASIC5.29□□□□□ -1.56
UBE3AQ05086 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UBE3AQ05086 AP002967.1-201ENST00000624203 539 ntBASIC5.29□□□□□ -1.56
UBE3AQ05086 AC010608.3-201ENST00000625048 527 ntBASIC5.29□□□□□ -1.56
UBE3AQ05086 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3AQ05086 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3AQ05086 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3AQ05086 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3AQ05086 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3AQ05086 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
UBE3AQ05086 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBE3AQ05086 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
UBE3AQ05086 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3AQ05086 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.29□□□□□ -1.56
UBE3AQ05086 MUC2-202ENST00000613187 4845 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 KARSP3-201ENST00000571212 1504 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
UBE3AQ05086 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 MIR92A2-201ENST00000385299 75 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 SNORD65C-201ENST00000390962 71 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AL390316.1-201ENST00000406279 553 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 RPL6P29-201ENST00000414863 865 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 TCEA1P2-201ENST00000420496 906 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC246680.2-201ENST00000422106 389 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 HSFY1P1-201ENST00000423928 1178 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 COX6CP13-201ENST00000428703 226 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 CDY14P-201ENST00000431260 1014 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 CDY12P-201ENST00000440679 1015 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 MED28P3-201ENST00000444288 531 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 CDY13P-201ENST00000445813 1015 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 CDY23P-201ENST00000451661 1014 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE3AQ05086 RPS5P7-201ENST00000456664 608 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC026979.1-201ENST00000492525 396 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC010376.1-201ENST00000522101 334 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE3AQ05086 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE3AQ05086 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AL359219.2-201ENST00000555184 348 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC124856.1-201ENST00000600819 896 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC098935.2-201ENST00000604222 466 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.28□□□□□ -1.56
UBE3AQ05086 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC022893.2-201ENST00000564832 3296 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 ECM1P2-201ENST00000503354 1577 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.28□□□□□ -1.56
UBE3AQ05086 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.28□□□□□ -1.56
UBE3AQ05086 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.28□□□□□ -1.56
UBE3AQ05086 ABCC13-202ENST00000463099 3842 ntBASIC5.28□□□□□ -1.56
UBE3AQ05086 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.28□□□□□ -1.56
UBE3AQ05086 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.27□□□□□ -1.57
UBE3AQ05086 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
UBE3AQ05086 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.27□□□□□ -1.57
UBE3AQ05086 AC073055.1-201ENST00000456901 1621 ntBASIC5.27□□□□□ -1.57
UBE3AQ05086 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.27□□□□□ -1.57
UBE3AQ05086 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
UBE3AQ05086 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 RN7SKP145-201ENST00000363291 303 ntBASIC5.27□□□□□ -1.57
UBE3AQ05086 AC093719.1-202ENST00000392735 373 ntBASIC5.27□□□□□ -1.57
UBE3AQ05086 AC009302.1-201ENST00000417147 390 ntBASIC5.27□□□□□ -1.57
UBE3AQ05086 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.27□□□□□ -1.57
UBE3AQ05086 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.27□□□□□ -1.57
UBE3AQ05086 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
UBE3AQ05086 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.27□□□□□ -1.57
UBE3AQ05086 OR51B8P-201ENST00000449892 769 ntBASIC5.27□□□□□ -1.57
UBE3AQ05086 AC091180.1-201ENST00000462104 372 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms