Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CEACAMP1-201ENST00000434624 1035 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC005154.2-201ENST00000438110 379 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC069277.2-201ENST00000454211 432 ntBASIC3.26□□□□□ -1.89
CCL20P78556 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC018797.3-201ENST00000513388 1241 ntBASIC3.26□□□□□ -1.89
CCL20P78556 RNA5SP362-201ENST00000516048 118 ntBASIC3.26□□□□□ -1.89
CCL20P78556 RN7SKP276-201ENST00000516242 268 ntBASIC3.26□□□□□ -1.89
CCL20P78556 RN7SKP66-201ENST00000516681 231 ntBASIC3.26□□□□□ -1.89
CCL20P78556 NPM1P52-201ENST00000518264 846 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCL20P78556 AC005363.1-201ENST00000530779 351 ntBASIC3.26□□□□□ -1.89
CCL20P78556 NPM1P35-201ENST00000533043 868 ntBASIC3.26□□□□□ -1.89
CCL20P78556 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.26□□□□□ -1.89
CCL20P78556 AC004825.1-201ENST00000555068 586 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 AC008521.2-201ENST00000591021 259 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC087763.1-201ENST00000603391 286 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC020910.2-201ENST00000603635 610 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC010200.2-201ENST00000605098 235 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC110741.2-201ENST00000605278 268 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL20P78556 AC009779.8-202ENST00000607990 932 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AL645927.2-201ENST00000618350 349 ntBASIC3.26□□□□□ -1.89
CCL20P78556 U7.8-201ENST00000619968 63 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC067852.7-201ENST00000623270 535 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC112694.2-201ENST00000623697 768 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC244205.2-202ENST00000635781 342 ntBASIC3.26□□□□□ -1.89
CCL20P78556 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL20P78556 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL20P78556 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL20P78556 AL049555.1-201ENST00000562834 1933 ntBASIC3.25□□□□□ -1.89
CCL20P78556 IPO8P1-201ENST00000455509 3109 ntBASIC3.25□□□□□ -1.89
CCL20P78556 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL20P78556 MIR223-201ENST00000385204 110 ntBASIC3.25□□□□□ -1.89
CCL20P78556 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCL20P78556 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 AL583835.1-201ENST00000399570 407 ntBASIC3.25□□□□□ -1.89
CCL20P78556 VN1R12P-201ENST00000403778 876 ntBASIC3.25□□□□□ -1.89
CCL20P78556 MIR1179-201ENST00000408703 91 ntBASIC3.25□□□□□ -1.89
CCL20P78556 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.25□□□□□ -1.89
CCL20P78556 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL20P78556 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.25□□□□□ -1.89
CCL20P78556 RPL12P34-201ENST00000424532 479 ntBASIC3.25□□□□□ -1.89
CCL20P78556 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL20P78556 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.25□□□□□ -1.89
CCL20P78556 NDUFS5P3-201ENST00000450668 321 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AURKAPS1-201ENST00000451805 1212 ntBASIC3.25□□□□□ -1.89
CCL20P78556 HIGD1AP8-201ENST00000453927 274 ntBASIC3.25□□□□□ -1.89
CCL20P78556 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.25□□□□□ -1.89
CCL20P78556 snoU13.20-201ENST00000459180 104 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC110749.1-201ENST00000462007 357 ntBASIC3.25□□□□□ -1.89
CCL20P78556 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.25□□□□□ -1.89
CCL20P78556 AC010307.1-201ENST00000467206 836 ntBASIC3.25□□□□□ -1.89
CCL20P78556 RPL7AP6-201ENST00000477943 801 ntBASIC3.25□□□□□ -1.89
CCL20P78556 METTL15P1-201ENST00000481421 1045 ntBASIC3.25□□□□□ -1.89
CCL20P78556 PFN1P8-201ENST00000497012 543 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL20P78556 AC013701.1-201ENST00000522657 465 ntBASIC3.25□□□□□ -1.89
CCL20P78556 SOX5P1-201ENST00000524155 1127 ntBASIC3.25□□□□□ -1.89
CCL20P78556 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.25□□□□□ -1.89
CCL20P78556 AC068714.1-201ENST00000559623 800 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.25□□□□□ -1.89
CCL20P78556 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
CCL20P78556 AC006116.3-201ENST00000592968 361 ntBASIC3.25□□□□□ -1.89
CCL20P78556 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 SNX6P1-201ENST00000601728 1224 ntBASIC3.25□□□□□ -1.89
CCL20P78556 Z82195.1-201ENST00000604558 398 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AL034351.1-201ENST00000605288 668 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC007390.2-201ENST00000606229 3803 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC004948.1-201ENST00000609858 672 ntBASIC3.25□□□□□ -1.89
CCL20P78556 MIR6853-201ENST00000619642 74 ntBASIC3.25□□□□□ -1.89
CCL20P78556 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCL20P78556 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCL20P78556 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCL20P78556 AL356317.1-201ENST00000396110 1436 ntBASIC3.25□□□□□ -1.89
CCL20P78556 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 PHKBP1-201ENST00000450951 1951 ntBASIC3.25□□□□□ -1.89
CCL20P78556 AC010329.2-201ENST00000595195 2737 ntBASIC3.25□□□□□ -1.89
CCL20P78556 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCL20P78556 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms