Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.8□□□□□ -1.96
RPL39P62891 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC2.8□□□□□ -1.96
RPL39P62891 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.8□□□□□ -1.96
RPL39P62891 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.8□□□□□ -1.96
RPL39P62891 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.8□□□□□ -1.96
RPL39P62891 OR52A4P-201ENST00000472867 958 ntBASIC2.8□□□□□ -1.96
RPL39P62891 RN7SL826P-201ENST00000479724 288 ntBASIC2.8□□□□□ -1.96
RPL39P62891 RPL35P6-201ENST00000490024 372 ntBASIC2.8□□□□□ -1.96
RPL39P62891 RN7SL691P-201ENST00000494487 301 ntBASIC2.8□□□□□ -1.96
RPL39P62891 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.8□□□□□ -1.96
RPL39P62891 OR5M14P-201ENST00000506803 618 ntBASIC2.8□□□□□ -1.96
RPL39P62891 NDUFB5P1-201ENST00000508134 564 ntBASIC2.8□□□□□ -1.96
RPL39P62891 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.8□□□□□ -1.96
RPL39P62891 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.8□□□□□ -1.96
RPL39P62891 AC008147.3-201ENST00000548666 354 ntBASIC2.8□□□□□ -1.96
RPL39P62891 TVP23BP1-201ENST00000557500 617 ntBASIC2.8□□□□□ -1.96
RPL39P62891 MIR4270-201ENST00000581799 70 ntBASIC2.8□□□□□ -1.96
RPL39P62891 MIR5684-201ENST00000585074 65 ntBASIC2.8□□□□□ -1.96
RPL39P62891 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.8□□□□□ -1.96
RPL39P62891 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RPL39P62891 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 OR56B2P-202ENST00000641377 2453 ntBASIC2.8□□□□□ -1.96
RPL39P62891 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
RPL39P62891 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 CR381670.1-201ENST00000624291 1693 ntBASIC2.79□□□□□ -1.96
RPL39P62891 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 AC131971.1-201ENST00000332881 1482 ntBASIC2.79□□□□□ -1.96
RPL39P62891 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RPL39P62891 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 AL672167.2-201ENST00000377164 879 ntBASIC2.79□□□□□ -1.96
RPL39P62891 RNA5SP87-201ENST00000384155 118 ntBASIC2.79□□□□□ -1.96
RPL39P62891 HSPE1P8-201ENST00000406997 288 ntBASIC2.79□□□□□ -1.96
RPL39P62891 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AC017078.1-201ENST00000416146 368 ntBASIC2.79□□□□□ -1.96
RPL39P62891 RPS26P13-201ENST00000419030 330 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AL365396.1-201ENST00000430854 671 ntBASIC2.79□□□□□ -1.96
RPL39P62891 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 HMGB1P37-201ENST00000439613 609 ntBASIC2.79□□□□□ -1.96
RPL39P62891 RPL12P11-201ENST00000439970 501 ntBASIC2.79□□□□□ -1.96
RPL39P62891 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 HMGB3P9-201ENST00000441799 583 ntBASIC2.79□□□□□ -1.96
RPL39P62891 RPS4XP4-201ENST00000443195 763 ntBASIC2.79□□□□□ -1.96
RPL39P62891 RPL7P61-201ENST00000451721 751 ntBASIC2.79□□□□□ -1.96
RPL39P62891 MTCO3P16-201ENST00000454456 754 ntBASIC2.79□□□□□ -1.96
RPL39P62891 DNAJC19P1-201ENST00000455312 319 ntBASIC2.79□□□□□ -1.96
RPL39P62891 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 RN7SL629P-201ENST00000489622 285 ntBASIC2.79□□□□□ -1.96
RPL39P62891 OR8G5-201ENST00000524943 1041 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 OR5D15P-201ENST00000531671 942 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.79□□□□□ -1.96
RPL39P62891 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 AC090948.1-201ENST00000607464 549 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AC016769.4-201ENST00000616893 535 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AC091905.1-201ENST00000624400 311 ntBASIC2.79□□□□□ -1.96
RPL39P62891 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 AC244205.2-202ENST00000635781 342 ntBASIC2.79□□□□□ -1.96
RPL39P62891 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.79□□□□□ -1.96
RPL39P62891 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.79□□□□□ -1.96
RPL39P62891 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RPL39P62891 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPL39P62891 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.78□□□□□ -1.96
RPL39P62891 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.78□□□□□ -1.96
RPL39P62891 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RPL39P62891 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPL39P62891 AL138878.1-201ENST00000405131 347 ntBASIC2.78□□□□□ -1.96
RPL39P62891 MIR1178-201ENST00000408396 91 ntBASIC2.78□□□□□ -1.96
RPL39P62891 RN7SKP182-201ENST00000410772 298 ntBASIC2.78□□□□□ -1.96
RPL39P62891 RHEBP3-201ENST00000411920 351 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.78□□□□□ -1.96
RPL39P62891 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.78□□□□□ -1.96
RPL39P62891 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 RPS26P40-201ENST00000435209 294 ntBASIC2.78□□□□□ -1.96
RPL39P62891 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.78□□□□□ -1.96
RPL39P62891 RPS3AP54-201ENST00000435535 734 ntBASIC2.78□□□□□ -1.96
RPL39P62891 AC009263.1-201ENST00000441193 1239 ntBASIC2.78□□□□□ -1.96
RPL39P62891 FCF1P7-201ENST00000451185 558 ntBASIC2.78□□□□□ -1.96
RPL39P62891 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC2.78□□□□□ -1.96
RPL39P62891 FABP3P2-201ENST00000453169 399 ntBASIC2.78□□□□□ -1.96
RPL39P62891 MTCO3P20-201ENST00000454926 688 ntBASIC2.78□□□□□ -1.96
RPL39P62891 RPL7P1-201ENST00000468161 747 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms