Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC068790.7-201ENST00000602347 528 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AL117336.2-201ENST00000602435 335 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AC087045.1-201ENST00000605856 382 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AC009994.1-201ENST00000606889 253 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.98□□□□□ -1.45
EPHB3P54753 AC012360.2-201ENST00000609349 391 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
EPHB3P54753 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 MIR8080-201ENST00000622224 89 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.98□□□□□ -1.45
EPHB3P54753 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.98□□□□□ -1.45
EPHB3P54753 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
EPHB3P54753 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
EPHB3P54753 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EPHB3P54753 SAMMSON-210ENST00000641260 1308 ntBASIC5.98□□□□□ -1.45
EPHB3P54753 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 NCOA4P2-201ENST00000340589 1813 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 OR9K1P-201ENST00000326513 941 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EPHB3P54753 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 RPS27AP11-201ENST00000402798 447 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AL590002.1-201ENST00000406554 418 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 RPS6P23-201ENST00000413224 722 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC016769.2-201ENST00000414815 475 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 BTF3P9-201ENST00000418784 283 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 NENFP1-201ENST00000419476 466 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 Z97055.1-201ENST00000419730 712 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 GLRXP1-201ENST00000423261 334 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.97□□□□□ -1.45
EPHB3P54753 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 OR5AW1P-201ENST00000426334 1006 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.97□□□□□ -1.45
EPHB3P54753 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 AL450023.1-201ENST00000450868 751 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AL606490.1-201ENST00000452266 765 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.97□□□□□ -1.45
EPHB3P54753 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 RN7SL51P-201ENST00000468230 285 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 HMGN1P10-201ENST00000474557 553 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 RN7SL583P-201ENST00000475692 287 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 TRBV5-2-201ENST00000489095 273 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 AC090071.1-201ENST00000507713 644 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 AC046134.1-201ENST00000514454 666 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 RNA5SP34-201ENST00000516887 130 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 DEFB108A-201ENST00000530110 222 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 OR11J2P-201ENST00000555298 907 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 MIR3912-201ENST00000577566 105 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC090616.5-202ENST00000582111 297 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC044792.1-201ENST00000593294 196 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AP001267.4-201ENST00000602598 545 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC091304.9-201ENST00000612091 226 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC015922.4-201ENST00000612568 690 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 AC104260.1-201ENST00000616660 539 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC073569.3-201ENST00000619055 682 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EPHB3P54753 AP005264.7-201ENST00000625003 745 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC025048.6-202ENST00000627667 438 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AL157786.1-207ENST00000627771 695 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
EPHB3P54753 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 MAPK10-261ENST00000641050 3109 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.97□□□□□ -1.45
EPHB3P54753 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHB3P54753 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHB3P54753 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
EPHB3P54753 AC007342.7-201ENST00000624610 2337 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms