Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLCN3P51790 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLCN3P51790 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN3P51790 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 CASC19-284ENST00000642142 1868 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AL603750.1-201ENST00000624216 1717 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLCN3P51790 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCN3P51790 RNU6-666P-201ENST00000363499 107 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 MIR620-201ENST00000385232 95 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 BX664727.1-201ENST00000416024 466 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC004690.1-201ENST00000418216 328 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 OR5M12P-201ENST00000423388 929 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 CHIAP3-201ENST00000423668 1133 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 PNRC2P1-201ENST00000423940 420 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 CKS1BP6-201ENST00000424932 240 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 MRPL50P1-201ENST00000431951 384 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AL035458.1-201ENST00000433096 585 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 CACYBPP1-201ENST00000438592 684 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 RNF2P1-201ENST00000442955 1010 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.09□□□□□ -1.59
CLCN3P51790 RPL21P126-201ENST00000470049 478 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 CYCSP20-201ENST00000473154 315 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 RPL21P47-201ENST00000483696 477 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC098799.3-201ENST00000506095 438 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC025674.1-201ENST00000507074 324 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC133963.2-201ENST00000513686 578 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 MTCO3P27-201ENST00000514397 196 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AP003355.1-201ENST00000518956 587 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC020937.1-201ENST00000519677 1013 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL358913.1-201ENST00000554342 121 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC115286.1-201ENST00000604298 434 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC018754.1-201ENST00000607486 925 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 AC145207.9-201ENST00000623802 325 ntBASIC5.09□□□□□ -1.59
CLCN3P51790 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN3P51790 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN3P51790 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCN3P51790 AL606537.1-201ENST00000607258 2011 ntBASIC5.09□□□□□ -1.6
CLCN3P51790 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLCN3P51790 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.09□□□□□ -1.6
CLCN3P51790 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLCN3P51790 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLCN3P51790 AL391684.1-202ENST00000641293 1636 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLCN3P51790 AC135352.1-201ENST00000506173 1418 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN3P51790 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 AC068538.1-201ENST00000376856 336 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RNU6-532P-201ENST00000384318 107 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RNU6-796P-201ENST00000391086 107 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 FABP12P1-201ENST00000401911 322 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RPS27AP11-201ENST00000402798 447 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AL592293.2-201ENST00000422292 996 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RPL12P34-201ENST00000424532 479 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 FTH1P16-201ENST00000435241 552 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RPL23AP93-201ENST00000440847 484 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 RPL7P33-201ENST00000444159 742 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RPL34P26-201ENST00000445636 354 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AC069540.1-201ENST00000446320 988 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 EIF2S2P2-201ENST00000447161 982 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 RPS20P4-201ENST00000461659 355 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN3P51790 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCN3P51790 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 RNU5A-7P-201ENST00000515979 116 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 SNORA31.13-201ENST00000516624 135 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 HIGD1AP18-201ENST00000520730 278 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms