Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 UBE2V1P2-201ENST00000397758 440 ntBASIC4.34□□□□□ -1.71
BRCA2P51587 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.34□□□□□ -1.71
BRCA2P51587 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.34□□□□□ -1.71
BRCA2P51587 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
BRCA2P51587 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.34□□□□□ -1.71
BRCA2P51587 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCA2P51587 AP003972.1-201ENST00000625192 5446 ntBASIC4.34□□□□□ -1.72
BRCA2P51587 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRCA2P51587 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.34□□□□□ -1.72
BRCA2P51587 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.34□□□□□ -1.72
BRCA2P51587 RPL7L1P13-201ENST00000511702 739 ntBASIC4.34□□□□□ -1.72
BRCA2P51587 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.34□□□□□ -1.72
BRCA2P51587 OR8I1P-201ENST00000529291 931 ntBASIC4.34□□□□□ -1.72
BRCA2P51587 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.34□□□□□ -1.72
BRCA2P51587 AC027176.2-201ENST00000559166 746 ntBASIC4.34□□□□□ -1.72
BRCA2P51587 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.34□□□□□ -1.72
BRCA2P51587 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
BRCA2P51587 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.34□□□□□ -1.72
BRCA2P51587 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.34□□□□□ -1.72
BRCA2P51587 AL078604.1-201ENST00000404609 466 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 HSFY4P-201ENST00000415994 1181 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AC069306.1-201ENST00000507006 843 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 AC097461.1-201ENST00000568928 2821 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
BRCA2P51587 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCA2P51587 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
BRCA2P51587 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BRCA2P51587 RNU4-64P-201ENST00000410795 131 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.33□□□□□ -1.72
BRCA2P51587 AC073063.1-201ENST00000434352 607 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AC004924.1-201ENST00000480160 781 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BRCA2P51587 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
BRCA2P51587 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BRCA2P51587 AL033543.1-201ENST00000623440 13454 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
BRCA2P51587 OR51H2P-202ENST00000641424 3046 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCA2P51587 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCA2P51587 RPS29P4-201ENST00000414733 161 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AL831737.1-201ENST00000441288 271 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCA2P51587 AC243654.2-201ENST00000612843 443 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 AC079684.1-201ENST00000621405 437 ntBASIC4.33□□□□□ -1.72
BRCA2P51587 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCA2P51587 AC022893.2-201ENST00000564832 3296 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.32□□□□□ -1.72
BRCA2P51587 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 RPL12P22-201ENST00000519073 490 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 AC005520.3-201ENST00000602874 370 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRCA2P51587 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.32□□□□□ -1.72
BRCA2P51587 CCAT2-201ENST00000630920 1752 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 MTCO1P24-201ENST00000515438 1558 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 Z75741.1-201ENST00000446793 314 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.32□□□□□ -1.72
BRCA2P51587 IGKV2-38-201ENST00000517443 247 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.32□□□□□ -1.72
BRCA2P51587 AC034105.3-201ENST00000565294 442 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
BRCA2P51587 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
BRCA2P51587 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 MTND2P15-201ENST00000418575 892 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 DPY19L1P2-201ENST00000426647 915 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 CYCSP24-201ENST00000445119 316 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 RN7SL504P-201ENST00000494496 287 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.31□□□□□ -1.72
BRCA2P51587 AP001273.1-201ENST00000624493 3152 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms