Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CXCL12P48061 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.29□□□□□ -1.72
CXCL12P48061 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CXCL12P48061 ADAM5-202ENST00000399789 1942 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 CDC27P2-201ENST00000425026 1922 ntBASIC4.29□□□□□ -1.72
CXCL12P48061 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL12P48061 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL12P48061 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL12P48061 OR11H4-201ENST00000315409 1082 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 RNU1-20P-201ENST00000363314 162 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 RNU1-63P-201ENST00000383902 164 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 MIR7-3-201ENST00000384898 110 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AC069157.1-201ENST00000421749 137 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL12P48061 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL12P48061 RPL7P15-201ENST00000461190 712 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AC090589.1-201ENST00000473109 362 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AK4P6-201ENST00000505168 528 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL12P48061 AC109635.6-201ENST00000525487 1113 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.28□□□□□ -1.72
CXCL12P48061 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.28□□□□□ -1.72
CXCL12P48061 AC069200.1-201ENST00000609511 323 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.28□□□□□ -1.72
CXCL12P48061 AC012442.3-202ENST00000636742 206 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CXCL12P48061 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL12P48061 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CXCL12P48061 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CXCL12P48061 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.28□□□□□ -1.72
CXCL12P48061 DHX9P1-201ENST00000436565 3076 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 BTBD10P1-201ENST00000549824 1352 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CXCL12P48061 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
CXCL12P48061 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL12P48061 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 FAM91A3P-201ENST00000456826 2544 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 SNORA63.1-201ENST00000362493 131 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 AC115285.1-201ENST00000424879 736 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 PPIAP13-201ENST00000434706 478 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 RPL6P5-201ENST00000445678 828 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 AL500522.2-201ENST00000448562 343 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 DDX39BP2-208ENST00000453923 258 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL12P48061 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CXCL12P48061 HPRT1P2-201ENST00000505250 544 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 PAICSP4-201ENST00000517543 1253 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL12P48061 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.27□□□□□ -1.73
CXCL12P48061 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.27□□□□□ -1.73
CXCL12P48061 AC005255.1-201ENST00000593748 216 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL12P48061 AC096553.1-201ENST00000605169 829 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 BNIP3P41-202ENST00000616656 861 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.27□□□□□ -1.73
CXCL12P48061 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CXCL12P48061 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 CASC19-261ENST00000641853 1638 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CXCL12P48061 AL161912.2-201ENST00000565707 3007 ntBASIC4.27□□□□□ -1.73
CXCL12P48061 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 CBX1P3-201ENST00000413296 527 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.26□□□□□ -1.73
CXCL12P48061 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 VN1R96P-201ENST00000446052 858 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL12P48061 snoU13.24-201ENST00000458998 104 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 RPL7P22-201ENST00000466005 733 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 RPL7P49-201ENST00000471402 708 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL12P48061 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL12P48061 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL12P48061 OR4A2P-201ENST00000527276 913 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms