Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU1-44P-201ENST00000384453 163 ntBASIC4.36□□□□□ -1.71
HTTP42858 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HTTP42858 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.36□□□□□ -1.71
HTTP42858 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
HTTP42858 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
HTTP42858 AL355365.1-201ENST00000616480 294 ntBASIC4.36□□□□□ -1.71
HTTP42858 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HTTP42858 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
HTTP42858 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 ZNF602P-201ENST00000405929 924 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 RN7SL807P-201ENST00000470923 297 ntBASIC4.35□□□□□ -1.71
HTTP42858 RN7SL809P-201ENST00000482040 297 ntBASIC4.35□□□□□ -1.71
HTTP42858 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 RN7SL504P-201ENST00000494496 287 ntBASIC4.35□□□□□ -1.71
HTTP42858 RNU7-143P-201ENST00000516781 65 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HTTP42858 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 AC093297.3-201ENST00000607056 2517 ntBASIC4.35□□□□□ -1.71
HTTP42858 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
HTTP42858 RPL7P44-201ENST00000424827 742 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC073063.1-201ENST00000434352 607 ntBASIC4.35□□□□□ -1.71
HTTP42858 Z75741.1-201ENST00000446793 314 ntBASIC4.35□□□□□ -1.71
HTTP42858 RPL23AP12-201ENST00000467573 473 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC096576.1-201ENST00000489014 359 ntBASIC4.35□□□□□ -1.71
HTTP42858 RPL7P23-201ENST00000493874 747 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.35□□□□□ -1.71
HTTP42858 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.35□□□□□ -1.71
HTTP42858 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
HTTP42858 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HTTP42858 BDP1P-201ENST00000582658 1990 ntBASIC4.35□□□□□ -1.71
HTTP42858 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
HTTP42858 RBMY1KP-201ENST00000423480 476 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC097713.2-201ENST00000430199 356 ntBASIC4.35□□□□□ -1.71
HTTP42858 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 RPS4XP18-201ENST00000495480 763 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.35□□□□□ -1.71
HTTP42858 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.35□□□□□ -1.71
HTTP42858 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.35□□□□□ -1.71
HTTP42858 MIR6715A-201ENST00000615929 79 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC079684.1-201ENST00000621405 437 ntBASIC4.35□□□□□ -1.71
HTTP42858 AC244258.1-201ENST00000637553 1071 ntBASIC4.35□□□□□ -1.71
HTTP42858 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.34□□□□□ -1.71
HTTP42858 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.34□□□□□ -1.71
HTTP42858 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.34□□□□□ -1.71
HTTP42858 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.34□□□□□ -1.71
HTTP42858 AC012213.2-201ENST00000562917 4597 ntBASIC4.34□□□□□ -1.71
HTTP42858 PEX12P1-201ENST00000400284 1048 ntBASIC4.34□□□□□ -1.71
HTTP42858 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.34□□□□□ -1.71
HTTP42858 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.34□□□□□ -1.71
HTTP42858 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.34□□□□□ -1.71
HTTP42858 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.34□□□□□ -1.71
HTTP42858 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HTTP42858 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.34□□□□□ -1.71
HTTP42858 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HTTP42858 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HTTP42858 RN7SKP186-201ENST00000365371 303 ntBASIC4.34□□□□□ -1.72
HTTP42858 RPL29P14-201ENST00000495837 428 ntBASIC4.34□□□□□ -1.72
HTTP42858 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HTTP42858 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.72
HTTP42858 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HTTP42858 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HTTP42858 AC097461.1-201ENST00000568928 2821 ntBASIC4.33□□□□□ -1.72
HTTP42858 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC4.33□□□□□ -1.72
HTTP42858 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 EIF4A1P11-201ENST00000451239 222 ntBASIC4.33□□□□□ -1.72
HTTP42858 RBMY2UP-201ENST00000453474 324 ntBASIC4.33□□□□□ -1.72
HTTP42858 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HTTP42858 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 MIR4660-201ENST00000583549 74 ntBASIC4.33□□□□□ -1.72
HTTP42858 AC138907.10-201ENST00000623708 983 ntBASIC4.33□□□□□ -1.72
HTTP42858 FRG1EP-201ENST00000634469 770 ntBASIC4.33□□□□□ -1.72
HTTP42858 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HTTP42858 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms