Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.04□□□□□ -1.6
SCN4AP35499 VN1R32P-201ENST00000452234 905 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4AP35499 RPL35AP15-201ENST00000468042 339 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4AP35499 SOD1P3-201ENST00000518682 454 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4AP35499 SETP1-201ENST00000556014 845 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC005412.1-201ENST00000580812 1049 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AL592436.1-201ENST00000605135 558 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4AP35499 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4AP35499 CASC19-284ENST00000642142 1868 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
SCN4AP35499 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SCN4AP35499 AC116667.1-201ENST00000604855 2072 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 RNA5SP72-201ENST00000364442 117 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 RNU4-6P-201ENST00000410804 122 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4AP35499 RPEP2-201ENST00000432149 701 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 CEACAMP1-201ENST00000434624 1035 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.03□□□□□ -1.6
SCN4AP35499 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 AC108751.2-201ENST00000469993 231 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4AP35499 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.03□□□□□ -1.6
SCN4AP35499 AC007991.1-201ENST00000522680 631 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.03□□□□□ -1.6
SCN4AP35499 AC005034.4-201ENST00000603612 899 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 AL021997.2-201ENST00000615674 271 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 MIR3651-201ENST00000630427 90 ntBASIC5.03□□□□□ -1.6
SCN4AP35499 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SCN4AP35499 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SCN4AP35499 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.03□□□□□ -1.6
SCN4AP35499 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4AP35499 NXPH1-205ENST00000602349 1953 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 NPM1P38-201ENST00000403835 865 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 HSPE1P12-201ENST00000412576 301 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 RPS26P4-201ENST00000431743 355 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4AP35499 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 RNA5SP497-201ENST00000516081 97 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 AC027807.1-201ENST00000559921 996 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4AP35499 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN4AP35499 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4AP35499 FAM91A3P-201ENST00000456826 2544 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SCN4AP35499 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4AP35499 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN4AP35499 AC092647.1-201ENST00000420654 287 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 EIF1P3-201ENST00000423841 334 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 HSFY1P1-201ENST00000423928 1178 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 SERPINA7P1-201ENST00000443077 631 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 RPS26P28-201ENST00000470806 348 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 RN7SKP46-201ENST00000515942 234 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4AP35499 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN4AP35499 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4AP35499 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN4AP35499 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN4AP35499 AL034408.1-202ENST00000636088 415 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 U6.105-201ENST00000637379 88 ntBASIC5.02□□□□□ -1.61
SCN4AP35499 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN4AP35499 AC068870.3-201ENST00000625077 2536 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN4AP35499 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
SCN4AP35499 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN4AP35499 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN4AP35499 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 AC007068.1-201ENST00000396690 844 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.01□□□□□ -1.61
SCN4AP35499 RPS4XP4-201ENST00000443195 763 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN4AP35499 AL031584.1-201ENST00000447169 754 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 AL451050.1-201ENST00000450126 415 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN4AP35499 RPL36AP13-201ENST00000457490 317 ntBASIC5.01□□□□□ -1.61
SCN4AP35499 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms