Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.54□□□□□ -1.36
CLIP1P30622 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.54□□□□□ -1.36
CLIP1P30622 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CLIP1P30622 QTRT1P1-201ENST00000604344 1078 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 AL031666.3-201ENST00000609320 1006 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 AC090912.3-201ENST00000609775 533 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.54□□□□□ -1.36
CLIP1P30622 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CLIP1P30622 AC090220.1-201ENST00000593078 1699 ntBASIC6.54□□□□□ -1.36
CLIP1P30622 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.54□□□□□ -1.36
CLIP1P30622 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CLIP1P30622 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CLIP1P30622 MIR23A-201ENST00000385245 73 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP1P30622 OR5BE1P-201ENST00000425977 939 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 AL445584.1-201ENST00000431451 330 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP1P30622 AL133547.1-201ENST00000448546 220 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.53□□□□□ -1.36
CLIP1P30622 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP1P30622 AC007599.1-201ENST00000568688 1174 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP1P30622 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.53□□□□□ -1.36
CLIP1P30622 OR5BE1P-202ENST00000641168 1176 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CLIP1P30622 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.53□□□□□ -1.36
CLIP1P30622 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CLIP1P30622 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
CLIP1P30622 AC093591.2-201ENST00000565254 3843 ntBASIC6.53□□□□□ -1.36
CLIP1P30622 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP1P30622 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP1P30622 GEMIN8P3-201ENST00000445417 720 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 AL358232.1-201ENST00000448030 501 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 RPS11P1-201ENST00000451072 473 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CLIP1P30622 HPRT1P2-201ENST00000505250 544 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
CLIP1P30622 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.52□□□□□ -1.37
CLIP1P30622 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.52□□□□□ -1.37
CLIP1P30622 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CLIP1P30622 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 NCOA4P2-201ENST00000340589 1813 ntBASIC6.52□□□□□ -1.37
CLIP1P30622 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.52□□□□□ -1.37
CLIP1P30622 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
CLIP1P30622 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CLIP1P30622 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.51□□□□□ -1.37
CLIP1P30622 AC018644.1-201ENST00000429934 551 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 MTND1P6-201ENST00000523621 946 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 MIR6868-201ENST00000611215 58 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 MIR6500-201ENST00000622700 86 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 TCP1P3-201ENST00000414406 1498 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 Z95327.2-201ENST00000414579 1873 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CLIP1P30622 MAPK10-372ENST00000641954 3413 ntBASIC6.51□□□□□ -1.37
CLIP1P30622 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.51□□□□□ -1.37
CLIP1P30622 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CLIP1P30622 RN7SKP74-201ENST00000362849 309 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 HDGFP1-201ENST00000405943 252 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
CLIP1P30622 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.5□□□□□ -1.37
CLIP1P30622 PDSS1P1-201ENST00000422953 1114 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AC006946.1-201ENST00000429106 328 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 MAPRE1P3-201ENST00000435438 796 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 RPL23AP89-201ENST00000439324 255 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 FCF1P7-201ENST00000451185 558 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 RPL29P14-201ENST00000495837 428 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 RNU7-143P-201ENST00000516781 65 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 OR5D2P-201ENST00000524390 911 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms