Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC116036.1-201ENST00000412199 367 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 Z93019.1-201ENST00000416450 973 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 TMBIM7P-201ENST00000418074 855 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC009237.2-201ENST00000421358 284 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 RPL34P3-201ENST00000421454 338 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 CYCSP46-201ENST00000423569 204 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 RPS3AP44-201ENST00000425466 790 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC126120.1-201ENST00000431082 470 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 AC092013.1-201ENST00000438795 332 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 TRIM60P18-201ENST00000441518 828 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC6.87□□□□□ -1.31
ERCC3P19447 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 AL672138.1-201ENST00000450604 1015 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 RPL30P9-201ENST00000465586 330 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 RPL7AP10-201ENST00000481016 791 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC008945.1-201ENST00000505144 499 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 SNX5P1-201ENST00000505757 1041 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.87□□□□□ -1.31
ERCC3P19447 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC3P19447 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC3P19447 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.87□□□□□ -1.31
ERCC3P19447 OR4H6P-201ENST00000563771 921 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AL596327.1-201ENST00000603629 213 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC013244.1-201ENST00000604279 193 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 RNU6-88P-201ENST00000606801 100 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC107214.2-201ENST00000608204 634 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AP001521.1-201ENST00000609150 300 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 AC005332.10-201ENST00000612725 619 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC007786.3-201ENST00000615154 596 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC025048.6-202ENST00000627667 438 ntBASIC6.87□□□□□ -1.31
ERCC3P19447 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC3P19447 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
ERCC3P19447 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
ERCC3P19447 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
ERCC3P19447 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.87□□□□□ -1.31
ERCC3P19447 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC3P19447 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 MTCO1P23-201ENST00000415223 1526 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 PARP4P2-201ENST00000446672 3326 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
ERCC3P19447 AC110373.1-201ENST00000505994 3505 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ERCC3P19447 AP002512.4-202ENST00000641599 4530 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
ERCC3P19447 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
ERCC3P19447 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ERCC3P19447 OR10R3P-201ENST00000361688 942 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 Y_RNA.517-201ENST00000384551 106 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 AL450338.1-201ENST00000407987 512 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 MIR1178-201ENST00000408396 91 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 NMD3P2-201ENST00000421815 761 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 NIPA2P1-201ENST00000426223 976 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC3P19447 AC092757.1-201ENST00000467293 467 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC090013.1-201ENST00000485147 480 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC008629.2-201ENST00000503783 483 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 MTCO2P32-201ENST00000514865 403 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC3P19447 SOD1P3-201ENST00000518682 454 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 OR6M2P-201ENST00000529831 871 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
ERCC3P19447 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC3P19447 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.86□□□□□ -1.31
ERCC3P19447 EIF5A2P1-201ENST00000564027 460 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 PCMTD1P2-201ENST00000565017 355 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.86□□□□□ -1.31
ERCC3P19447 AC012414.6-201ENST00000568241 401 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC074051.3-201ENST00000570238 358 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms