Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
CD53P19397 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
CD53P19397 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.05□□□□□ -1.6
CD53P19397 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD53P19397 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.05□□□□□ -1.6
CD53P19397 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.05□□□□□ -1.6
CD53P19397 IMMP1LP3-201ENST00000604197 224 ntBASIC5.05□□□□□ -1.6
CD53P19397 HSPE1P14-201ENST00000605812 302 ntBASIC5.05□□□□□ -1.6
CD53P19397 AL136295.6-201ENST00000610486 658 ntBASIC5.05□□□□□ -1.6
CD53P19397 U73479.1-201ENST00000618062 168 ntBASIC5.05□□□□□ -1.6
CD53P19397 VN1R7P-201ENST00000619242 903 ntBASIC5.05□□□□□ -1.6
CD53P19397 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CD53P19397 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD53P19397 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD53P19397 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CD53P19397 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.05□□□□□ -1.6
CD53P19397 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD53P19397 ABCC13-202ENST00000463099 3842 ntBASIC5.05□□□□□ -1.6
CD53P19397 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.05□□□□□ -1.6
CD53P19397 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD53P19397 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.04□□□□□ -1.6
CD53P19397 OR11H5P-202ENST00000641612 1325 ntBASIC5.04□□□□□ -1.6
CD53P19397 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 AL590763.1-201ENST00000398297 1545 ntBASIC5.04□□□□□ -1.6
CD53P19397 SNORA73.1-201ENST00000363107 205 ntBASIC5.04□□□□□ -1.6
CD53P19397 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 SNORA70-201ENST00000384436 135 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC005042.1-201ENST00000393397 800 ntBASIC5.04□□□□□ -1.6
CD53P19397 MTND4P22-201ENST00000413116 1169 ntBASIC5.04□□□□□ -1.6
CD53P19397 MRPL53P1-201ENST00000414323 319 ntBASIC5.04□□□□□ -1.6
CD53P19397 RIMKLBP2-201ENST00000424737 654 ntBASIC5.04□□□□□ -1.6
CD53P19397 AL732292.1-201ENST00000426692 226 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.04□□□□□ -1.6
CD53P19397 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.04□□□□□ -1.6
CD53P19397 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 AC006335.2-201ENST00000437993 330 ntBASIC5.04□□□□□ -1.6
CD53P19397 PTMAP6-201ENST00000439110 327 ntBASIC5.04□□□□□ -1.6
CD53P19397 AL645638.1-201ENST00000440519 361 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC104306.1-201ENST00000449702 371 ntBASIC5.04□□□□□ -1.6
CD53P19397 HMGB3P30-201ENST00000457863 606 ntBASIC5.04□□□□□ -1.6
CD53P19397 AL157777.1-201ENST00000468100 304 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC099521.1-201ENST00000482557 334 ntBASIC5.04□□□□□ -1.6
CD53P19397 RPS23P1-201ENST00000491662 432 ntBASIC5.04□□□□□ -1.6
CD53P19397 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
CD53P19397 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 TMEM248P1-201ENST00000510579 951 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC008837.1-201ENST00000511513 412 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.04□□□□□ -1.6
CD53P19397 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.04□□□□□ -1.6
CD53P19397 RNA5SP135-201ENST00000517019 125 ntBASIC5.04□□□□□ -1.6
CD53P19397 snoZ278.1-201ENST00000517059 112 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.04□□□□□ -1.6
CD53P19397 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.04□□□□□ -1.6
CD53P19397 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 AL049872.1-201ENST00000556323 322 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 MIR4760-201ENST00000585040 80 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 AC011453.2-201ENST00000603737 729 ntBASIC5.04□□□□□ -1.6
CD53P19397 AP000238.1-201ENST00000608759 426 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC008147.4-201ENST00000617570 1204 ntBASIC5.04□□□□□ -1.6
CD53P19397 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 uc_338.7-201ENST00000621834 124 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC010872.1-201ENST00000624225 675 ntBASIC5.04□□□□□ -1.6
CD53P19397 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.04□□□□□ -1.6
CD53P19397 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.04□□□□□ -1.6
CD53P19397 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD53P19397 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD53P19397 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
CD53P19397 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 AC111188.2-201ENST00000529697 1387 ntBASIC5.04□□□□□ -1.6
CD53P19397 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD53P19397 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CD53P19397 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 AL355578.1-201ENST00000607405 1328 ntBASIC5.03□□□□□ -1.6
CD53P19397 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.03□□□□□ -1.6
CD53P19397 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.03□□□□□ -1.6
CD53P19397 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.03□□□□□ -1.6
CD53P19397 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD53P19397 AC096533.1-201ENST00000411645 353 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms