Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 AC093853.1-201ENST00000515689 483 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
TOP2AP11388 AC008759.1-201ENST00000589783 983 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 AC097505.1-201ENST00000610199 565 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 AC005344.1-201ENST00000613391 459 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP2AP11388 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TOP2AP11388 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC7.07□□□□□ -1.28
TOP2AP11388 SPATA31D2P-201ENST00000429999 4388 ntBASIC7.07□□□□□ -1.28
TOP2AP11388 MIR183-201ENST00000384958 110 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 ATP5F1P4-201ENST00000397288 746 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 HMGN2P31-201ENST00000432430 273 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 RNU1-95P-201ENST00000516357 160 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 RNU1-128P-201ENST00000516704 160 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TOP2AP11388 U6.105-201ENST00000637379 88 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 ZNF402P-201ENST00000404435 3100 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
TOP2AP11388 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
TOP2AP11388 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.06□□□□□ -1.28
TOP2AP11388 MIR7-3-201ENST00000384898 110 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 MIR1271-201ENST00000408537 86 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP2AP11388 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 DEFB109F-201ENST00000491870 277 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.06□□□□□ -1.28
TOP2AP11388 UBE2CP3-201ENST00000502715 450 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 SNORA74D-201ENST00000516404 141 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 LSM3P2-201ENST00000551246 273 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.06□□□□□ -1.28
TOP2AP11388 SNX6P1-201ENST00000601728 1224 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AC096577.2-201ENST00000611455 153 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 AL645927.2-201ENST00000618350 349 ntBASIC7.06□□□□□ -1.28
TOP2AP11388 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.06□□□□□ -1.28
TOP2AP11388 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.06□□□□□ -1.28
TOP2AP11388 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.06□□□□□ -1.28
TOP2AP11388 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP2AP11388 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TOP2AP11388 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP2AP11388 AL356274.2-201ENST00000624379 3752 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP2AP11388 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TOP2AP11388 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TOP2AP11388 MIR200C-201ENST00000384980 68 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 Z97055.1-201ENST00000419730 712 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 AC004448.2-201ENST00000422360 586 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 AL139247.1-201ENST00000422768 325 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP2AP11388 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.05□□□□□ -1.28
TOP2AP11388 AC018635.1-201ENST00000468292 1030 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC7.05□□□□□ -1.28
TOP2AP11388 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.05□□□□□ -1.28
TOP2AP11388 AC022968.1-201ENST00000567372 442 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.05□□□□□ -1.28
TOP2AP11388 AC096553.1-201ENST00000605169 829 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 AL138721.1-201ENST00000616756 179 ntBASIC7.05□□□□□ -1.28
TOP2AP11388 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TOP2AP11388 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TOP2AP11388 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TOP2AP11388 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP2AP11388 ZNF962P-201ENST00000443465 3140 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP2AP11388 AC090602.1-201ENST00000469695 252 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.04□□□□□ -1.28
TOP2AP11388 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.04□□□□□ -1.28
TOP2AP11388 SOD1P3-201ENST00000518682 454 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.04□□□□□ -1.28
TOP2AP11388 AC091167.4-201ENST00000605079 184 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 AL391261.4-201ENST00000616012 481 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 AC022106.2-201ENST00000620114 757 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 MIR7702-201ENST00000621931 59 ntBASIC7.04□□□□□ -1.28
TOP2AP11388 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TOP2AP11388 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TOP2AP11388 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TOP2AP11388 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.03□□□□□ -1.28
TOP2AP11388 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP2AP11388 CYCSP53-201ENST00000455540 265 ntBASIC7.03□□□□□ -1.28
TOP2AP11388 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
TOP2AP11388 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 AC007599.1-201ENST00000568688 1174 ntBASIC7.03□□□□□ -1.28
TOP2AP11388 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.03□□□□□ -1.28
TOP2AP11388 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP2AP11388 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC7.03□□□□□ -1.28
TOP2AP11388 AC019176.2-201ENST00000611579 315 ntBASIC7.03□□□□□ -1.28
TOP2AP11388 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TOP2AP11388 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TOP2AP11388 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TOP2AP11388 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TOP2AP11388 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.02□□□□□ -1.29
TOP2AP11388 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms