Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 IGLV2-28-201ENST00000520681 304 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.97□□□□□ -1.77
UBCP0CG48 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.97□□□□□ -1.77
UBCP0CG48 AC021006.3-201ENST00000530771 192 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AP001880.2-201ENST00000538233 448 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.97□□□□□ -1.77
UBCP0CG48 HMGN2P6-201ENST00000551091 273 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.97□□□□□ -1.77
UBCP0CG48 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.97□□□□□ -1.77
UBCP0CG48 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.97□□□□□ -1.77
UBCP0CG48 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.97□□□□□ -1.77
UBCP0CG48 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.97□□□□□ -1.77
UBCP0CG48 BPIFA4P-203ENST00000603168 689 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.97□□□□□ -1.77
UBCP0CG48 AL138721.1-201ENST00000616756 179 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.97□□□□□ -1.77
UBCP0CG48 U3.53-201ENST00000628922 216 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.97□□□□□ -1.77
UBCP0CG48 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.97□□□□□ -1.77
UBCP0CG48 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBCP0CG48 PNPT1P2-201ENST00000456768 2050 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBCP0CG48 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.97□□□□□ -1.77
UBCP0CG48 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 AL139811.1-201ENST00000424779 2299 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
UBCP0CG48 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBCP0CG48 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
UBCP0CG48 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBCP0CG48 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.96□□□□□ -1.77
UBCP0CG48 NXPH1-205ENST00000602349 1953 ntBASIC3.96□□□□□ -1.77
UBCP0CG48 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.96□□□□□ -1.77
UBCP0CG48 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 AC093311.1-201ENST00000506586 2021 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 RNA5SP113-201ENST00000410486 84 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 COX6B1P1-201ENST00000415962 213 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 HMGB1P32-201ENST00000425971 565 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 RPS6P12-201ENST00000432491 726 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 EEF1A1P1-201ENST00000447052 739 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 S100A11P1-201ENST00000477525 312 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 AC011037.1-201ENST00000483964 558 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.96□□□□□ -1.78
UBCP0CG48 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 SOX5P1-201ENST00000524155 1127 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.96□□□□□ -1.78
UBCP0CG48 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 EIF1AXP2-201ENST00000555940 413 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.96□□□□□ -1.78
UBCP0CG48 MIR3667-201ENST00000581025 74 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.96□□□□□ -1.78
UBCP0CG48 AC010201.1-201ENST00000605051 540 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.96□□□□□ -1.78
UBCP0CG48 AL035461.2-201ENST00000619201 524 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 AC103858.2-201ENST00000621471 543 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 AC007342.8-201ENST00000623278 678 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
UBCP0CG48 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBCP0CG48 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.96□□□□□ -1.78
UBCP0CG48 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.96□□□□□ -1.78
UBCP0CG48 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
UBCP0CG48 OR11H5P-202ENST00000641612 1325 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 USP9YP4-201ENST00000424401 1745 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
UBCP0CG48 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 AC011266.1-201ENST00000624119 3569 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 C4BPAP1-201ENST00000415474 1893 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 LINC00622-201ENST00000562811 1570 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 RNU6-819P-201ENST00000364116 107 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 RNU6-31P-201ENST00000384388 108 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AL603766.1-201ENST00000407763 664 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 RN7SKP100-201ENST00000411258 284 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 RAD23BP1-201ENST00000421404 1227 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms