Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 NDUFA5P9-201ENST00000472609 340 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC138701.1-201ENST00000524329 714 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 OR5M7P-201ENST00000526140 972 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 RPL23AP87-202ENST00000573039 466 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 RN7SL600P-201ENST00000581811 299 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC114878.2-201ENST00000604863 1251 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQB2P05538 AC104118.1-201ENST00000607625 1589 ntBASIC4.19□□□□□ -1.74
HLA-DQB2P05538 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 RNU11-4P-201ENST00000391149 133 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 RN7SKP33-201ENST00000410942 340 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC234779.1-201ENST00000425910 285 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 PTMAP3-201ENST00000447474 330 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC010618.1-201ENST00000469924 477 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 RN7SL604P-201ENST00000492589 296 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 RNU7-143P-201ENST00000516781 65 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 MRPL49P2-201ENST00000521066 465 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 MIR5684-201ENST00000585074 65 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC090246.1-201ENST00000616499 426 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AL023881.1-201ENST00000621088 301 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC095038.2-201ENST00000621464 1070 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AC079298.2-201ENST00000623885 459 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 AP005264.7-201ENST00000625003 745 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 OR52H1-202ENST00000641796 1061 ntBASIC4.18□□□□□ -1.74
HLA-DQB2P05538 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DQB2P05538 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 RNA5SP513-201ENST00000364648 118 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 C4BPAP2-201ENST00000428434 478 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AL358472.1-201ENST00000431295 329 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 ARAFP2-201ENST00000440565 559 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 RPL7AP28-201ENST00000464513 571 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 OR51K1P-201ENST00000510214 950 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 RN7SKP122-201ENST00000515923 296 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC022882.1-201ENST00000532142 501 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC069240.1-201ENST00000548774 375 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC079171.1-201ENST00000568788 914 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 QTRT1P1-201ENST00000604344 1078 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC083809.1-201ENST00000615051 472 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC244517.3-201ENST00000616254 1235 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 AC006840.1-201ENST00000623069 542 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DQB2P05538 MIR6830-201ENST00000636015 70 ntBASIC4.17□□□□□ -1.74
HLA-DQB2P05538 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms