Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IMMP1LP1-201ENST00000605170 488 ntBASIC4.83□□□□□ -1.64
VTNP04004 AC135803.1-201ENST00000608748 565 ntBASIC4.83□□□□□ -1.64
VTNP04004 AC023043.4-201ENST00000612081 449 ntBASIC4.83□□□□□ -1.64
VTNP04004 MIR8069-1-201ENST00000616627 86 ntBASIC4.83□□□□□ -1.64
VTNP04004 MIR8069-2-201ENST00000621412 86 ntBASIC4.83□□□□□ -1.64
VTNP04004 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.83□□□□□ -1.64
VTNP04004 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VTNP04004 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
VTNP04004 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VTNP04004 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 AP001002.1-201ENST00000625148 1513 ntBASIC4.82□□□□□ -1.64
VTNP04004 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 MIR383-201ENST00000362257 73 ntBASIC4.82□□□□□ -1.64
VTNP04004 RNA5SP28-201ENST00000363841 119 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC097374.1-203ENST00000400783 485 ntBASIC4.82□□□□□ -1.64
VTNP04004 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.82□□□□□ -1.64
VTNP04004 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 MFSD13B-201ENST00000420133 1290 ntBASIC4.82□□□□□ -1.64
VTNP04004 REREP1Y-201ENST00000422655 198 ntBASIC4.82□□□□□ -1.64
VTNP04004 RPL23AP38-201ENST00000423801 469 ntBASIC4.82□□□□□ -1.64
VTNP04004 REREP2Y-201ENST00000439103 200 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC114495.1-201ENST00000441274 436 ntBASIC4.82□□□□□ -1.64
VTNP04004 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.82□□□□□ -1.64
VTNP04004 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.82□□□□□ -1.64
VTNP04004 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.82□□□□□ -1.64
VTNP04004 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
VTNP04004 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC107015.1-201ENST00000466902 747 ntBASIC4.82□□□□□ -1.64
VTNP04004 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.82□□□□□ -1.64
VTNP04004 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.82□□□□□ -1.64
VTNP04004 MTND3P24-201ENST00000506306 329 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.82□□□□□ -1.64
VTNP04004 FABP5P6-201ENST00000510588 409 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.82□□□□□ -1.64
VTNP04004 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.82□□□□□ -1.64
VTNP04004 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.82□□□□□ -1.64
VTNP04004 OR4R2P-201ENST00000530815 597 ntBASIC4.82□□□□□ -1.64
VTNP04004 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 MIR3160-1-201ENST00000577972 85 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.82□□□□□ -1.64
VTNP04004 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 AL133247.2-201ENST00000603236 482 ntBASIC4.82□□□□□ -1.64
VTNP04004 AL160290.3-201ENST00000604869 165 ntBASIC4.82□□□□□ -1.64
VTNP04004 AL355802.4-201ENST00000607635 548 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 BNIP3P41-202ENST00000616656 861 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC234782.5-201ENST00000617723 324 ntBASIC4.82□□□□□ -1.64
VTNP04004 RMST_5.1-201ENST00000618704 126 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
VTNP04004 AC079298.2-201ENST00000623885 459 ntBASIC4.82□□□□□ -1.64
VTNP04004 AP003499.2-201ENST00000624100 483 ntBASIC4.82□□□□□ -1.64
VTNP04004 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 AC068870.3-201ENST00000625077 2536 ntBASIC4.82□□□□□ -1.64
VTNP04004 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VTNP04004 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VTNP04004 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 AP000756.2-201ENST00000624168 2567 ntBASIC4.81□□□□□ -1.64
VTNP04004 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 AC009501.3-201ENST00000605001 1352 ntBASIC4.81□□□□□ -1.64
VTNP04004 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 AL161909.1-201ENST00000397390 712 ntBASIC4.81□□□□□ -1.64
VTNP04004 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.81□□□□□ -1.64
VTNP04004 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.81□□□□□ -1.64
VTNP04004 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 MTND2P21-201ENST00000436242 1042 ntBASIC4.81□□□□□ -1.64
VTNP04004 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 VN1R48P-201ENST00000448149 1036 ntBASIC4.81□□□□□ -1.64
VTNP04004 AL353718.1-201ENST00000451028 517 ntBASIC4.81□□□□□ -1.64
VTNP04004 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 RPL35AP15-201ENST00000468042 339 ntBASIC4.81□□□□□ -1.64
VTNP04004 RN7SL691P-201ENST00000494487 301 ntBASIC4.81□□□□□ -1.64
VTNP04004 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.81□□□□□ -1.64
VTNP04004 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.81□□□□□ -1.64
VTNP04004 AC008958.1-201ENST00000511047 682 ntBASIC4.81□□□□□ -1.64
VTNP04004 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.81□□□□□ -1.64
VTNP04004 AC026402.1-201ENST00000513642 170 ntBASIC4.81□□□□□ -1.64
VTNP04004 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.81□□□□□ -1.64
VTNP04004 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.81□□□□□ -1.64
VTNP04004 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.81□□□□□ -1.64
VTNP04004 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.81□□□□□ -1.64
VTNP04004 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VTNP04004 CKS1BP1-201ENST00000555221 240 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms