Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 OR5H3P-201ENST00000502817 919 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.51□□□□□ -1.69
CLPTM1O96005 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AP001372.4-201ENST00000524889 472 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 OR10G5P-201ENST00000532733 358 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.51□□□□□ -1.69
CLPTM1O96005 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC090666.1-201ENST00000578241 445 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 FAM106CP-201ENST00000582212 507 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 CBX3P2-202ENST00000583365 535 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.51□□□□□ -1.69
CLPTM1O96005 AC130352.1-201ENST00000602979 661 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC007275.1-201ENST00000621243 671 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 AC067931.1-201ENST00000624190 671 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.51□□□□□ -1.69
CLPTM1O96005 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLPTM1O96005 ZNF90P1-201ENST00000480493 1951 ntBASIC4.51□□□□□ -1.69
CLPTM1O96005 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLPTM1O96005 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.51□□□□□ -1.69
CLPTM1O96005 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC132825.1-201ENST00000463573 2247 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC109780.1-201ENST00000451768 1344 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLPTM1O96005 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLPTM1O96005 RHOT1P2-201ENST00000366423 333 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 MIR600-201ENST00000385007 98 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 RPL22P22-201ENST00000395439 379 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 RPL6P29-201ENST00000414863 865 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 BTF3P9-201ENST00000418784 283 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 FO393414.1-201ENST00000428697 1184 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AL353748.1-201ENST00000440753 474 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 HMGB1P4-201ENST00000455362 567 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 Z92846.1-201ENST00000456203 268 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 RN7SL443P-201ENST00000464331 290 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 RN7SL727P-201ENST00000482164 296 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC116562.1-201ENST00000485355 781 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC006499.3-201ENST00000506077 748 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC012400.1-201ENST00000518452 381 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.5□□□□□ -1.69
CLPTM1O96005 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AP003066.2-201ENST00000529375 555 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.5□□□□□ -1.69
CLPTM1O96005 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 HAUS8P1-201ENST00000549005 542 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC021483.2-201ENST00000567415 758 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC016180.1-201ENST00000567945 403 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC027455.1-201ENST00000574104 594 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 OR7E18P-201ENST00000592589 702 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC123786.2-201ENST00000603459 275 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AL139395.1-201ENST00000603662 160 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC013244.1-201ENST00000604279 193 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC087783.2-201ENST00000605070 562 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 AP001033.2-201ENST00000609701 1003 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC008759.3-201ENST00000613300 508 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLPTM1O96005 AC090527.3-201ENST00000619041 548 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC012414.7-202ENST00000622705 1090 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC021106.3-201ENST00000623925 531 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 AC073342.3-201ENST00000624211 193 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.5□□□□□ -1.69
CLPTM1O96005 MIR6715B-201ENST00000637172 77 ntBASIC4.5□□□□□ -1.69
CLPTM1O96005 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms