Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.49□□□□□ -1.69
SNX3O60493 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
SNX3O60493 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX3O60493 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX3O60493 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.49□□□□□ -1.69
SNX3O60493 MIR432-201ENST00000606207 94 ntBASIC4.49□□□□□ -1.69
SNX3O60493 VN1R9P-201ENST00000614184 867 ntBASIC4.49□□□□□ -1.69
SNX3O60493 AC018926.1-201ENST00000616335 435 ntBASIC4.49□□□□□ -1.69
SNX3O60493 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.49□□□□□ -1.69
SNX3O60493 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SNX3O60493 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SNX3O60493 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SNX3O60493 AC017007.4-201ENST00000503353 1352 ntBASIC4.49□□□□□ -1.69
SNX3O60493 NXPH1-205ENST00000602349 1953 ntBASIC4.49□□□□□ -1.69
SNX3O60493 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.48□□□□□ -1.69
SNX3O60493 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX3O60493 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 AC099654.2-201ENST00000433031 1980 ntBASIC4.48□□□□□ -1.69
SNX3O60493 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 SNURFL-201ENST00000309296 343 ntBASIC4.48□□□□□ -1.69
SNX3O60493 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 RNA5SP307-201ENST00000362863 116 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL355143.1-201ENST00000407101 841 ntBASIC4.48□□□□□ -1.69
SNX3O60493 UBE2V1P11-201ENST00000411559 285 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AC069282.1-201ENST00000411911 526 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 RPS23P10-201ENST00000416185 486 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 AC008173.1-201ENST00000418901 264 ntBASIC4.48□□□□□ -1.69
SNX3O60493 RPL24P2-201ENST00000421023 475 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX3O60493 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 RPS12P5-201ENST00000423449 371 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 CFL1P1-202ENST00000432948 411 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 AP000281.1-201ENST00000444036 316 ntBASIC4.48□□□□□ -1.69
SNX3O60493 HMGN1P2-201ENST00000445197 310 ntBASIC4.48□□□□□ -1.69
SNX3O60493 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 RPL23AP2-201ENST00000471227 466 ntBASIC4.48□□□□□ -1.69
SNX3O60493 METTL15P1-201ENST00000481421 1045 ntBASIC4.48□□□□□ -1.69
SNX3O60493 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX3O60493 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX3O60493 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.48□□□□□ -1.69
SNX3O60493 RN7SL466P-201ENST00000497546 295 ntBASIC4.48□□□□□ -1.69
SNX3O60493 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC098799.3-201ENST00000506095 438 ntBASIC4.48□□□□□ -1.69
SNX3O60493 RNU6-347P-201ENST00000516658 105 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 IGLVIV-64-201ENST00000518581 301 ntBASIC4.48□□□□□ -1.69
SNX3O60493 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.48□□□□□ -1.69
SNX3O60493 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC005363.1-201ENST00000530779 351 ntBASIC4.48□□□□□ -1.69
SNX3O60493 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 AC133555.2-201ENST00000550213 292 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC068714.1-201ENST00000559623 800 ntBASIC4.48□□□□□ -1.69
SNX3O60493 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX3O60493 MEMO1P5-201ENST00000604810 406 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AC233309.1-201ENST00000619522 751 ntBASIC4.48□□□□□ -1.69
SNX3O60493 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SNX3O60493 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SNX3O60493 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SNX3O60493 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SNX3O60493 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX3O60493 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX3O60493 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
SNX3O60493 VN2R3P-201ENST00000422626 1412 ntBASIC4.47□□□□□ -1.69
SNX3O60493 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX3O60493 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX3O60493 HSPD1P11-201ENST00000508643 1702 ntBASIC4.47□□□□□ -1.69
SNX3O60493 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX3O60493 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX3O60493 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms