Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 BTF3L4P4-201ENST00000506381 449 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AC090888.3-201ENST00000558917 509 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AC122134.1-201ENST00000565664 1104 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.32□□□□□ -1.88
SSSCA1O60232 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AC113403.1-201ENST00000604910 193 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.32□□□□□ -1.88
SSSCA1O60232 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SSSCA1O60232 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 ERCC6-202ENST00000374127 1782 ntBASIC3.32□□□□□ -1.88
SSSCA1O60232 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SSSCA1O60232 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSSCA1O60232 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.31□□□□□ -1.88
SSSCA1O60232 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.31□□□□□ -1.88
SSSCA1O60232 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 SNORD35B-201ENST00000363660 87 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 SNORD113.2-201ENST00000364166 89 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 MIR3074-201ENST00000384885 81 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 SNORA11F-201ENST00000408237 128 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 RPL23AP27-201ENST00000415161 451 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 MFSD13B-201ENST00000420133 1290 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AL157831.1-201ENST00000426134 473 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 NPM1P34-201ENST00000428821 893 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 IFNNP1-201ENST00000429219 553 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 ATP5HP2-201ENST00000433885 485 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AC008072.1-201ENST00000434254 824 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 FTH1P16-201ENST00000435241 552 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 RPL31P44-201ENST00000447680 377 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AL500522.2-201ENST00000448562 343 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 RPL29P14-201ENST00000495837 428 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 PRELID3BP7-201ENST00000503606 469 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.31□□□□□ -1.88
SSSCA1O60232 RNU7-143P-201ENST00000516781 65 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AC141257.3-201ENST00000572906 215 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 EIF1P6-201ENST00000600054 334 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 MIR6715B-201ENST00000637172 77 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 MIR4302-201ENST00000638058 60 ntBASIC3.31□□□□□ -1.88
SSSCA1O60232 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.31□□□□□ -1.88
SSSCA1O60232 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSSCA1O60232 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.31□□□□□ -1.88
SSSCA1O60232 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 HSPA8P17-201ENST00000427029 1382 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC233968.1-201ENST00000611212 1300 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 OR11H5P-202ENST00000641612 1325 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 OR11H4-201ENST00000315409 1082 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 AC011155.1-201ENST00000316512 456 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR56A4-201ENST00000330728 1209 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 RNU1-18P-201ENST00000363062 164 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 MIR1251-201ENST00000408552 70 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.3□□□□□ -1.88
SSSCA1O60232 RPL7P4-203ENST00000430239 730 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.3□□□□□ -1.88
SSSCA1O60232 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 RNA5SP73-201ENST00000516744 108 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 IGLVIV-65-201ENST00000517313 360 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 IGLV2-28-201ENST00000520681 304 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 DEFB109D-201ENST00000529497 240 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms