Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC016180.1-201ENST00000567945 403 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 MTND2P13-201ENST00000577438 1039 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL32P-201ENST00000580514 281 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM106CP-201ENST00000582212 507 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL591222.2-201ENST00000604443 754 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL160290.3-201ENST00000604869 165 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC007423.1-201ENST00000605009 627 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010201.1-201ENST00000605051 540 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL365503.1-201ENST00000605247 905 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC091167.5-201ENST00000605689 894 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AP002360.3-201ENST00000607673 710 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RMST_8.1-201ENST00000610287 165 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC019278.1-201ENST00000623516 479 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LDHA-225ENST00000625635 141 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 DLST-216ENST00000626051 252 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AP001052.1-201ENST00000626421 99 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 EEF1A1P36-201ENST00000427807 1351 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC106872.5-201ENST00000508856 1416 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 MTND5P27-201ENST00000428871 1720 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL592494.2-201ENST00000425455 1548 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP477-201ENST00000362639 119 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 SNORA71.2-201ENST00000364941 134 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR591-201ENST00000385290 95 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU1-82P-201ENST00000390851 165 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL391422.1-201ENST00000402155 436 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SKP100-201ENST00000411258 284 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS20P14-201ENST00000412545 360 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL591848.1-201ENST00000413092 322 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 P2RY10P2-201ENST00000416730 913 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS12P10-201ENST00000427031 377 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 NEK4P1-201ENST00000433383 879 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC019185.3-201ENST00000438805 323 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL23AP89-201ENST00000439324 255 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 HMGN1P32-201ENST00000441744 256 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 TXNP2-201ENST00000443918 295 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC007383.1-201ENST00000445875 636 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 HMGN2P21-201ENST00000447764 270 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 ABCF2P2-201ENST00000450549 296 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC010733.1-201ENST00000451515 401 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL354872.1-201ENST00000456361 967 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC089999.1-201ENST00000460336 374 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL319P-201ENST00000480656 221 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL812P-201ENST00000493791 279 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SKP60-201ENST00000516985 239 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL12P22-201ENST00000519073 490 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 NPM1P35-201ENST00000533043 868 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC037471.2-201ENST00000564941 598 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 MT1CP-201ENST00000567054 174 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR4425-201ENST00000580572 84 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC067852.4-201ENST00000590314 478 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC068020.1-201ENST00000594215 661 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 TEX41-218ENST00000596540 882 ntTSL 5 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC105254.2-201ENST00000603636 436 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AL591424.2-201ENST00000617023 128 ntBASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.29□□□□□ -2.04
CHKB-CPT1BH3BT56 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms