Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC022882.1-201ENST00000532142 501 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CR383656.6-201ENST00000550518 394 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 PSMA6P4-201ENST00000603247 718 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC233280.2-201ENST00000603917 1070 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 SUMO2P14-201ENST00000604488 293 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 COX6CP4-201ENST00000605798 228 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AL023583.1-201ENST00000607518 1143 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 MIR6780A-201ENST00000615089 68 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC139769.3-201ENST00000618383 175 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 AC024023.1-201ENST00000624530 922 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 CASC19-204ENST00000641001 2055 ntBASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.71
ATG4BQ9Y4P1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 OR56B2P-201ENST00000317102 954 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP224-201ENST00000364140 325 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 MIR192-201ENST00000384915 110 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL357078.2-201ENST00000416486 427 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC073464.3-201ENST00000422564 712 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 RPS24P8-201ENST00000431490 402 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC007000.2-201ENST00000442564 487 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC073264.2-201ENST00000448886 166 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL445433.1-201ENST00000457507 257 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 RN7SKP46-201ENST00000515942 234 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 RNA5SP360-201ENST00000516555 118 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 IGKV2D-10-201ENST00000520194 281 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 OR5M2P-201ENST00000529003 936 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC107918.3-201ENST00000533272 382 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 MIR4330-201ENST00000579077 105 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL450270.1-201ENST00000606160 391 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC025175.1-201ENST00000606482 759 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC004775.1-201ENST00000607389 753 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 MIR6748-201ENST00000610433 71 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC016957.2-201ENST00000616998 848 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AL355852.1-201ENST00000454081 1771 ntBASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4BQ9Y4P1 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 TAF9BP2-201ENST00000400856 499 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 MIR298-201ENST00000401212 88 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 GSTM3P2-201ENST00000412746 530 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 RPL26P29-201ENST00000415623 438 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL359265.2-201ENST00000434367 631 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL590762.3-201ENST00000436372 640 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL138878.2-201ENST00000440581 1241 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 RPL23AP37-201ENST00000479658 549 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms