Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-169P-201ENST00000365336 107 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.380-201ENST00000365663 111 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.462-201ENST00000384268 102 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-601P-201ENST00000384540 107 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-606P-201ENST00000384721 111 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AP000275.1-201ENST00000411943 390 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC104837.2-201ENST00000427236 424 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AL121578.2-201ENST00000448797 447 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 BX248409.1-201ENST00000455497 255 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC097493.1-201ENST00000463958 372 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 UBFD1P1-201ENST00000473259 814 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-201P-201ENST00000517100 61 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC026458.1-201ENST00000564330 438 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 IGLJCOR18-201ENST00000584002 424 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 BX664608.1-201ENST00000610519 487 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 EIF3FP1-201ENST00000613970 806 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 MRPL57P3-201ENST00000619218 176 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 AC138915.4-201ENST00000565549 4147 ntBASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.98□□□□□ -0.97
TRIM35Q9UPQ4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RN7SKP189-201ENST00000365042 330 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RNU4-66P-201ENST00000365199 138 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 PPIAP26-201ENST00000377951 522 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-890P-201ENST00000384121 107 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.478-201ENST00000384358 107 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 MT-TW-201ENST00000387382 68 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RPA2P2-201ENST00000419698 796 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC019097.1-201ENST00000424783 735 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 SKA2P1-201ENST00000425592 390 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 SNRPEP7-201ENST00000438350 220 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 PRPS1P1-201ENST00000445305 876 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 PRPF38AP1-201ENST00000451976 933 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RPSAP51-201ENST00000497462 645 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 Y_RNA.673-201ENST00000516306 88 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-885P-201ENST00000516607 104 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-1212P-201ENST00000517023 104 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-111P-201ENST00000517179 105 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC090572.1-201ENST00000519251 160 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 SUMO2P20-201ENST00000520803 283 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 OR5M2P-201ENST00000529003 936 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC103843.2-201ENST00000530523 682 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC123904.2-201ENST00000548059 300 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AL591767.3-201ENST00000554632 525 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 RPS4XP21-201ENST00000603814 750 ntBASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM35Q9UPQ4 AC020978.8-201ENST00000571975 3022 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms