Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AL592436.1-201ENST00000605135 558 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC093591.2-201ENST00000565254 3843 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 RN7SKP156-201ENST00000410308 342 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AL161631.1-201ENST00000417933 486 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 ARL4AP4-201ENST00000434170 518 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC083863.1-201ENST00000438811 231 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 EIF2S2P5-201ENST00000457635 968 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 TPT1P1-201ENST00000458495 518 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 USP9YP2-201ENST00000504503 1000 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 USP9YP1-201ENST00000513521 1002 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 RN7SKP46-201ENST00000515942 234 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC100770.1-201ENST00000532310 322 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 MIR5685-201ENST00000579080 79 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 QTRT1P1-201ENST00000604344 1078 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC019278.1-201ENST00000623516 479 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC032011.1-201ENST00000611703 1549 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC004448.2-201ENST00000422360 586 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC091390.3-201ENST00000426478 338 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 KATNBL1P2-201ENST00000433311 835 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 NOTCH2P1-201ENST00000443481 624 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 RNA5SP103-201ENST00000459503 118 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 RN7SKP141-201ENST00000516167 338 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC026403.1-201ENST00000518938 295 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC091516.1-201ENST00000549191 703 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC090912.3-201ENST00000609775 533 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC099669.2-201ENST00000616549 437 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.28□□□□□ -1.56
SCN11AQ9UI33 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN11AQ9UI33 AC016588.2-201ENST00000632484 3021 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 PTMAP2-201ENST00000397627 327 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC091564.1-201ENST00000464563 479 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 RPL7P24-201ENST00000493052 752 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AF131215.7-201ENST00000602443 707 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC104662.1-201ENST00000604448 511 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC012468.1-201ENST00000604888 430 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 MIR432-201ENST00000606207 94 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 MIR195-201ENST00000385194 87 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AL500522.2-201ENST00000448562 343 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 RPS20P21-201ENST00000466859 343 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC006517.1-201ENST00000480485 328 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 RNA5SP179-201ENST00000517284 121 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC103968.1-201ENST00000557841 573 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 MIR3944-201ENST00000581277 108 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC107993.1-201ENST00000591343 684 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AC064801.1-201ENST00000612025 407 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 AL357559.1-201ENST00000622228 274 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms