Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.59□□□□□ -1.52
COL20A1Q9P218 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC079741.1-201ENST00000321498 212 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 RNU4-28P-201ENST00000364739 141 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL136310.1-201ENST00000404926 654 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 COX5BP7-201ENST00000414780 274 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 RPS3AP37-201ENST00000419176 745 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 MTND2P16-201ENST00000419987 799 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL354766.1-201ENST00000423396 542 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL645608.4-201ENST00000423619 154 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 YWHAEP5-201ENST00000431545 765 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL589880.1-201ENST00000448271 287 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC073264.2-201ENST00000448886 166 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 SLC25A18P1-201ENST00000449385 454 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 RN7SL738P-201ENST00000470264 297 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 RN7SL459P-201ENST00000481078 302 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC069528.1-202ENST00000482888 637 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 BOLA3P3-201ENST00000505182 232 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AP006289.1-201ENST00000538089 277 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL358913.1-201ENST00000554342 121 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 ZNF92P3-201ENST00000596594 954 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL035411.2-201ENST00000604022 421 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC104687.2-201ENST00000604442 342 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC079395.3-201ENST00000615161 484 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL20A1Q9P218 U6.107-201ENST00000637108 79 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL20A1Q9P218 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.58□□□□□ -1.52
COL20A1Q9P218 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 NSRP1P1-201ENST00000444067 1693 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 MIR192-201ENST00000384915 110 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 RNU4-22P-201ENST00000411058 166 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 TAF13P2-201ENST00000416876 286 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 QRSL1P2-201ENST00000418582 964 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 OR2X1P-201ENST00000421144 687 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC084290.1-201ENST00000434995 374 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC005154.2-201ENST00000438110 379 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 MTCYBP31-201ENST00000438855 1122 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 RPS6P2-201ENST00000454208 705 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC090602.1-201ENST00000469695 252 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 SNORA70.11-201ENST00000515987 138 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 SNORA70.13-201ENST00000516116 138 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 RN7SKP276-201ENST00000516242 268 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC124293.1-201ENST00000530034 493 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC116553.2-201ENST00000564203 463 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC023824.3-201ENST00000569003 562 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC234771.5-201ENST00000600161 514 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AL583832.1-201ENST00000603227 784 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC009948.4-201ENST00000604692 675 ntBASIC5.57□□□□□ -1.52
COL20A1Q9P218 AC010424.2-201ENST00000607594 443 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms