Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC104072.1-201ENST00000568817 668 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 BNIP3P32-201ENST00000600015 554 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC110792.4-201ENST00000609843 298 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL627230.1-201ENST00000613077 211 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL359513.1-201ENST00000614364 557 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AL121873.1-201ENST00000616013 524 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC103858.2-201ENST00000621471 543 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 AC090971.4-201ENST00000560291 1800 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 MTCO1P11-201ENST00000429111 1528 ntBASIC4.41□□□□□ -1.7
NDE1Q9NXR1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.41□□□□□ -1.7
NDE1Q9NXR1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 ZNF733P-202ENST00000444809 1573 ntBASIC4.4□□□□□ -1.7
NDE1Q9NXR1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.4□□□□□ -1.7
NDE1Q9NXR1 OR4K17-201ENST00000315543 1032 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RNU6-792P-201ENST00000363490 107 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 SNORA74A-201ENST00000364089 198 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 OR13C3-201ENST00000374781 1108 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RNU6-1263P-201ENST00000384601 106 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 GSTA12P-201ENST00000402398 508 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 NCSTNP1-201ENST00000406229 144 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RN7SKP229-201ENST00000410465 302 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL591848.1-201ENST00000413092 322 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RPS12P5-201ENST00000423449 371 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AP000281.1-201ENST00000444036 316 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 SUMO2P1-206ENST00000445436 284 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC006326.1-201ENST00000445465 787 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL627224.1-201ENST00000448334 444 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 HMGN1P5-201ENST00000448591 263 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RPL31P15-201ENST00000449770 338 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL606490.1-201ENST00000452266 765 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC079168.2-201ENST00000453977 416 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL389915.2-201ENST00000454576 441 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RN7SL174P-201ENST00000475578 289 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 MTCO2P9-201ENST00000503214 694 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 PGAM1P13-201ENST00000507497 754 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 RN7SKP157-201ENST00000516174 282 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC004923.2-201ENST00000529649 369 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 UBTFL9-201ENST00000534504 1148 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AP003117.1-201ENST00000602771 554 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 MTCO3P22-201ENST00000603219 784 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AL589674.2-201ENST00000604304 337 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC010201.1-201ENST00000605051 540 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC022306.3-201ENST00000619930 550 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC127024.6-201ENST00000621598 424 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC107021.2-201ENST00000567714 2095 ntBASIC4.4□□□□□ -1.71
NDE1Q9NXR1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NDE1Q9NXR1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC011155.1-201ENST00000316512 456 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 RNA5SP455-201ENST00000365190 119 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 RNU1-63P-201ENST00000383902 164 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 SNORD65-201ENST00000391079 73 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 ATP5F1P6-201ENST00000402768 767 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 RPS23P10-201ENST00000416185 486 ntBASIC4.39□□□□□ -1.71
NDE1Q9NXR1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.39□□□□□ -1.71
NDE1Q9NXR1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms