Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU1-32P-201ENST00000363937 159 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RAB28P1-201ENST00000411517 641 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC119751.6-201ENST00000416712 186 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 NDUFA5P10-201ENST00000432147 357 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 MTND4P6-201ENST00000438297 472 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RPL7P33-201ENST00000444159 742 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 MTND1P29-201ENST00000448112 647 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 OR1H1P-201ENST00000448731 937 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC091180.1-201ENST00000462104 372 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RN7SL354P-201ENST00000469282 294 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 PRDX3P4-201ENST00000470828 747 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RN7SL481P-201ENST00000477764 299 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 MTCO3P35-201ENST00000485582 781 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 MTND4LP2-201ENST00000502312 285 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC010486.3-201ENST00000511602 785 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 Y_RNA.655-201ENST00000515919 96 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AL356057.1-201ENST00000533798 831 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 GLRXP2-201ENST00000555594 321 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC022884.2-201ENST00000578535 580 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC209154.1-201ENST00000582156 337 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC010620.1-201ENST00000601088 1102 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC068790.4-201ENST00000602474 263 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AL512782.1-201ENST00000603093 364 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC020910.3-201ENST00000603701 874 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 RNU6-84P-201ENST00000607737 102 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC021755.4-201ENST00000616620 456 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC078883.4-201ENST00000623218 367 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 AC093875.1-201ENST00000623688 504 ntBASIC5.14□□□□□ -1.59
EBF3Q9H4W6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.14□□□□□ -1.59
EBF3Q9H4W6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 SETP15-201ENST00000412724 337 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC009238.2-201ENST00000431026 355 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 PTP4A1P3-201ENST00000433661 420 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 RPL21P133-201ENST00000443666 476 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 RPL36AP15-201ENST00000444514 266 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC069540.1-201ENST00000446320 988 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AL513533.1-201ENST00000453728 415 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC006967.1-201ENST00000467608 589 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 SUMO2P5-201ENST00000506790 245 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 SNORA19.3-201ENST00000516165 130 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 RNA5SP464-201ENST00000516251 108 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC012339.2-201ENST00000523996 453 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AP001880.2-201ENST00000538233 448 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 NOP56P3-201ENST00000549457 385 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 MTND3P13-201ENST00000574391 343 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AP005136.1-201ENST00000579765 429 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC233702.9-201ENST00000581528 203 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC061975.8-201ENST00000587058 721 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AL606834.3-201ENST00000602615 496 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC113368.1-201ENST00000603736 382 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC002487.1-201ENST00000604565 994 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms