Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL389915.1-201ENST00000422463 466 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL034379.1-201ENST00000423216 253 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL732292.1-201ENST00000426692 226 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 RPL7P32-201ENST00000457119 744 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 RPL5P16-201ENST00000471467 790 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC106806.2-201ENST00000509365 500 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC022882.1-201ENST00000532142 501 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL352979.3-201ENST00000553515 247 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 RPL12P25-202ENST00000598100 674 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC233280.2-201ENST00000603917 1070 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC012409.3-201ENST00000611343 981 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 AC019278.1-201ENST00000623516 479 ntBASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
UPF3BQ9BZI7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 MIR137-201ENST00000385223 102 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 MIR3065-201ENST00000390137 79 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 SNORA11C-201ENST00000408532 129 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 HLA-N-201ENST00000437516 135 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 HMGB3P9-201ENST00000441799 583 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 RPL7P33-201ENST00000444159 742 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 Z95327.1-201ENST00000446082 482 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 AC073587.1-201ENST00000447093 876 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 OR8G5-201ENST00000524943 1041 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 AC011270.1-201ENST00000558606 583 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 MIR3939-201ENST00000582614 106 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 AC079298.2-201ENST00000623885 459 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 MAPK10-304ENST00000641341 3984 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 CASC19-255ENST00000641733 1385 ntBASIC5.16□□□□□ -1.58
UPF3BQ9BZI7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.15□□□□□ -1.58
UPF3BQ9BZI7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
UPF3BQ9BZI7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 MIR331-201ENST00000362302 94 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 RPL17P50-201ENST00000396131 546 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 RPL23AP59-201ENST00000399415 461 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 CYCSP10-201ENST00000417973 294 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 NDUFA5P1-201ENST00000433858 341 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 SNORA84-201ENST00000459229 133 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC104849.1-201ENST00000462623 405 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 RPS27AP16-201ENST00000492222 470 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 PHBP17-201ENST00000528576 541 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC106785.1-201ENST00000565935 262 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AC124856.1-201ENST00000600819 896 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AL122126.1-201ENST00000546905 1318 ntBASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
UPF3BQ9BZI7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AL592148.3-201ENST00000608771 2646 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 RNU1-108P-201ENST00000362556 161 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms