Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC005005.2-201ENST00000420779 380 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.92□□□□□ -1.46
NUP88Q99567 AC008072.1-201ENST00000434254 824 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP88Q99567 AL031663.1-201ENST00000437445 219 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 IGHV5-78-201ENST00000450948 295 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 RPL7AP52-201ENST00000458096 790 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP88Q99567 AC140172.1-201ENST00000502928 141 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 AC016559.2-201ENST00000510759 359 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 OR7H2P-201ENST00000513483 306 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 OR8A2P-201ENST00000528631 952 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 GCSHP4-201ENST00000538792 439 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP88Q99567 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP88Q99567 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.92□□□□□ -1.46
NUP88Q99567 AC009117.1-201ENST00000563948 554 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 AC011487.3-201ENST00000593607 453 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP88Q99567 AL031320.1-201ENST00000604177 357 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 MIR6839-201ENST00000620425 113 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.92□□□□□ -1.46
NUP88Q99567 AC017104.5-201ENST00000637647 639 ntBASIC5.92□□□□□ -1.46
NUP88Q99567 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NUP88Q99567 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUP88Q99567 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NUP88Q99567 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
NUP88Q99567 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NUP88Q99567 NSRP1P1-201ENST00000444067 1693 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.46
NUP88Q99567 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 AC006210.2-201ENST00000367074 1545 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP88Q99567 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NUP88Q99567 RNU6-317P-201ENST00000384031 107 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 CYB5AP4-201ENST00000396692 399 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 MTCO1P56-201ENST00000401674 224 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 MTND2P16-201ENST00000419987 799 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC073052.1-201ENST00000440417 714 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 RPS6P2-201ENST00000454208 705 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 NAP1L1P3-201ENST00000462291 880 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC092324.1-201ENST00000468671 324 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP88Q99567 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 RN7SL244P-201ENST00000493405 297 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 MTCO3P15-201ENST00000526563 574 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP88Q99567 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 AL390726.5-202ENST00000564800 256 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 MTCYBP13-201ENST00000578634 1093 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP88Q99567 PRPF19P1-201ENST00000584766 898 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AL445423.1-201ENST00000609941 536 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AC009237.15-201ENST00000610252 501 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 AL355493.4-201ENST00000618530 292 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 AP002967.1-201ENST00000624203 539 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 OR1S1-201ENST00000624470 978 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP88Q99567 MTND4P31-201ENST00000425607 1343 ntBASIC5.91□□□□□ -1.46
NUP88Q99567 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NUP88Q99567 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP88Q99567 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP88Q99567 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms