Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL391497.1-201ENST00000608671 547 ntBASIC6.86□□□□□ -1.31
IFT140Q96RY7 AC005344.1-201ENST00000613391 459 ntBASIC6.86□□□□□ -1.31
IFT140Q96RY7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
IFT140Q96RY7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 AC093297.3-201ENST00000607056 2517 ntBASIC6.86□□□□□ -1.31
IFT140Q96RY7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
IFT140Q96RY7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.86□□□□□ -1.31
IFT140Q96RY7 SNORA60-201ENST00000362396 134 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 OR4F13P-201ENST00000428478 931 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 RPS4XP12-201ENST00000461747 709 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 RNA5SP249-201ENST00000516127 99 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 RNU1-103P-201ENST00000516502 125 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 AC092354.2-201ENST00000607786 514 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
IFT140Q96RY7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 RPS29P4-201ENST00000414733 161 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 RPL36AP13-201ENST00000457490 317 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 AC114878.2-201ENST00000604863 1251 ntBASIC6.85□□□□□ -1.31
IFT140Q96RY7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.85□□□□□ -1.31
IFT140Q96RY7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 MTCO1P12-201ENST00000414273 1543 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
IFT140Q96RY7 AC100778.3-201ENST00000580060 1750 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
IFT140Q96RY7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
IFT140Q96RY7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 AL590609.2-201ENST00000421430 368 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 BNIP3P41-201ENST00000503774 571 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 SCARNA14-201ENST00000516903 136 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
IFT140Q96RY7 AL645927.2-201ENST00000618350 349 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 FRG1EP-201ENST00000634469 770 ntBASIC6.84□□□□□ -1.31
IFT140Q96RY7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
IFT140Q96RY7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
IFT140Q96RY7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
IFT140Q96RY7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
IFT140Q96RY7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
IFT140Q96RY7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
IFT140Q96RY7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
IFT140Q96RY7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
IFT140Q96RY7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 OR52E6-202ENST00000379946 954 ntBASIC6.83□□□□□ -1.32
IFT140Q96RY7 CTSL3P-202ENST00000412179 788 ntBASIC6.83□□□□□ -1.32
IFT140Q96RY7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 AC018635.1-201ENST00000468292 1030 ntBASIC6.83□□□□□ -1.32
IFT140Q96RY7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
IFT140Q96RY7 AC021242.1-201ENST00000507315 2035 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 NAMPTP1-201ENST00000440465 2514 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 HIST1H2APS3-201ENST00000403259 134 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 MIR1911-201ENST00000410783 80 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 MIR3922-201ENST00000585192 84 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 AC015726.1-201ENST00000602353 681 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
IFT140Q96RY7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
IFT140Q96RY7 AC074029.4-201ENST00000624796 1859 ntBASIC6.82□□□□□ -1.32
IFT140Q96RY7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
IFT140Q96RY7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
IFT140Q96RY7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
IFT140Q96RY7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.81□□□□□ -1.32
IFT140Q96RY7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.81□□□□□ -1.32
IFT140Q96RY7 RN7SKP13-201ENST00000515933 244 ntBASIC6.81□□□□□ -1.32
IFT140Q96RY7 AC027216.1-201ENST00000577726 685 ntBASIC6.81□□□□□ -1.32
IFT140Q96RY7 AC109446.4-201ENST00000623235 2755 ntBASIC6.81□□□□□ -1.32
IFT140Q96RY7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
IFT140Q96RY7 AC105074.1-201ENST00000623380 3095 ntBASIC6.81□□□□□ -1.32
IFT140Q96RY7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms