Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 GSTA7P-201ENST00000438425 448 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC012671.1-201ENST00000451912 203 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 DDX39BP2-208ENST00000453923 258 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 NDUFA12P1-201ENST00000455914 406 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 OR52A4P-201ENST00000472867 958 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC111000.3-201ENST00000508057 576 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 IFITM8P-201ENST00000522529 394 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC093765.1-201ENST00000603758 881 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 CPHL1P-201ENST00000461341 3407 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 OR56B2P-202ENST00000641377 2453 ntBASIC4.17□□□□□ -1.74
COL21A1Q96P44 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL21A1Q96P44 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
COL21A1Q96P44 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 SNORD74.4-201ENST00000364129 80 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 MIR513A2-201ENST00000385249 127 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 MIR708-201ENST00000390708 88 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 RNA5SP332-201ENST00000391063 115 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 TRIM60P17-201ENST00000415181 719 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC245028.1-201ENST00000423259 256 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 NDUFA5P1-201ENST00000433858 341 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 VN1R32P-201ENST00000452234 905 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 FGF7P3-201ENST00000454645 303 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL133244.1-201ENST00000456007 258 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 RPS29P33-201ENST00000456717 146 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 SEPT14P1-201ENST00000458703 648 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 SEPT7P6-201ENST00000469999 1143 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 RN7SL738P-201ENST00000470264 297 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 CEACAMP10-202ENST00000495431 496 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AK3P4-201ENST00000504283 583 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC093720.1-201ENST00000505681 714 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL049874.4-201ENST00000557593 255 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC020915.5-201ENST00000596836 964 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL139395.1-201ENST00000603662 160 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL160290.3-201ENST00000604869 165 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC019193.2-201ENST00000610012 634 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL121873.1-201ENST00000616013 524 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC007546.2-201ENST00000623996 360 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AC007342.7-201ENST00000624610 2337 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL21A1Q96P44 AL132640.2-201ENST00000559968 1698 ntBASIC4.16□□□□□ -1.74
COL21A1Q96P44 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL21A1Q96P44 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.15□□□□□ -1.74
COL21A1Q96P44 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL21A1Q96P44 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
COL21A1Q96P44 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL21A1Q96P44 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 MIR659-201ENST00000384963 97 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 RAB28P1-201ENST00000411517 641 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 RPL26P29-201ENST00000415623 438 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AL807761.1-201ENST00000417622 171 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 MTND6P18-201ENST00000439477 513 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 RPL23AP43-201ENST00000446445 471 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC022431.1-201ENST00000450941 438 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AL672167.3-201ENST00000465951 960 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AC018442.3-201ENST00000523025 183 ntBASIC4.15□□□□□ -1.75
COL21A1Q96P44 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL21A1Q96P44 AP000827.1-201ENST00000527814 258 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms