Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NXPH1-205ENST00000602349 1953 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 LAP3P1-201ENST00000403648 294 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 SNRPFP1-201ENST00000414761 252 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 RPL23AP25-201ENST00000430973 463 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 RPS20P1-201ENST00000434853 354 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 RPL31P20-201ENST00000449593 360 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 CALM1P2-201ENST00000452941 448 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 CLIC4P1-201ENST00000453177 535 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 RPS27AP17-201ENST00000463344 455 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 HIGD1AP5-201ENST00000529959 259 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC068446.3-201ENST00000555285 382 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 RNF138P2-201ENST00000603490 592 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC034236.3-201ENST00000605999 461 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC097505.1-201ENST00000610199 565 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC091905.2-201ENST00000623143 306 ntBASIC4.62□□□□□ -1.67
RPRD1AQ96P16 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPRD1AQ96P16 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 RNU6-670P-201ENST00000364312 104 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 U3.22-201ENST00000391120 215 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 ELOCP19-201ENST00000411919 318 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 TMSB10P2-201ENST00000416049 131 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL356387.2-201ENST00000422272 243 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC011998.1-201ENST00000433403 117 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 FTH1P16-201ENST00000435241 552 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 RPL12P46-201ENST00000436610 195 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL157884.3-201ENST00000448273 1184 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL162388.1-201ENST00000450912 352 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC009220.1-201ENST00000451614 275 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 RNA5SP497-201ENST00000516081 97 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 C1GALT1P3-201ENST00000522049 819 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC009643.1-201ENST00000532030 391 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 TRAV11-201ENST00000539512 339 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC087888.1-201ENST00000550884 1254 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AP001160.4-201ENST00000596971 382 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AF230666.2-201ENST00000602328 725 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC005191.1-201ENST00000603950 358 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC090948.1-201ENST00000607464 549 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL121873.1-201ENST00000616013 524 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AL035461.2-201ENST00000619201 524 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 AC009229.4-201ENST00000623854 1947 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RPRD1AQ96P16 HSPD1P14-201ENST00000432666 1618 ntBASIC4.61□□□□□ -1.67
RPRD1AQ96P16 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC022893.2-201ENST00000564832 3296 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC011155.1-201ENST00000316512 456 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 RNA5SP28-201ENST00000363841 119 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 RNU1-63P-201ENST00000383902 164 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 Z85994.2-201ENST00000434327 452 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms