Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 OR4H6P-201ENST00000563771 921 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC090751.1-201ENST00000566966 267 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 MIR3913-1-201ENST00000577744 102 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC233280.2-201ENST00000603917 1070 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AP000907.4-201ENST00000604143 237 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC069304.2-201ENST00000605154 435 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RPL12P48-201ENST00000605620 304 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC008945.2-201ENST00000606056 604 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AP001437.1-201ENST00000608783 456 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL359535.1-201ENST00000612100 1087 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL352984.2-202ENST00000613699 155 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 MIR6071-201ENST00000616741 78 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CRYM-AS1-204ENST00000637983 556 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 DCAF13P1-201ENST00000495256 1330 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RNU6-462P-201ENST00000362659 105 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RNA5SP433-201ENST00000364491 114 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 SNORA51.9-201ENST00000384295 124 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL590290.1-201ENST00000405336 380 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL136131.1-201ENST00000406079 803 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL136133.1-201ENST00000413694 376 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AKR1B10P1-201ENST00000425765 942 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC115283.1-201ENST00000427353 400 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RPL23AP19-201ENST00000436229 369 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC110602.1-201ENST00000437414 318 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 DNAJC19P5-201ENST00000443295 316 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 YWHAQP9-201ENST00000445891 512 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RPS27AP15-201ENST00000447672 466 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC114755.5-201ENST00000447760 831 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RBMY2TP-201ENST00000451162 947 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC013267.1-201ENST00000458227 267 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 snoU109.1-201ENST00000459339 135 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC068228.1-201ENST00000461723 211 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AP002884.1-201ENST00000479691 655 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 DUTP7-201ENST00000507982 486 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC010342.1-201ENST00000514047 877 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RNA5SP434-201ENST00000516647 121 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 OR5M7P-201ENST00000526140 972 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 OR8Q1P-201ENST00000526467 655 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC115286.1-201ENST00000604298 434 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AP003117.2-201ENST00000606010 545 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC141002.1-201ENST00000607025 279 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AP000894.4-201ENST00000610185 483 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC092266.1-201ENST00000610958 165 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AL138960.1-201ENST00000613838 513 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC243756.2-201ENST00000618406 463 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 AC021106.3-201ENST00000623925 531 ntBASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD1Q96NR3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 405.4 ms