Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC008280.1-201ENST00000418851 412 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RPL34P6-201ENST00000432390 345 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC093156.1-201ENST00000440382 670 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 SNRPBP1-201ENST00000443634 282 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-CQ95604 MTCO3P2-201ENST00000457365 171 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RNU6-333P-201ENST00000459117 107 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AL355032.1-201ENST00000472981 438 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RN7SL797P-201ENST00000486314 297 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 COX6B1P2-201ENST00000489624 230 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RPL23AP72-201ENST00000492447 435 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 RPS4XP14-201ENST00000493072 781 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 Y_RNA.682-201ENST00000516457 100 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AP000889.2-201ENST00000532684 490 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC007537.1-201ENST00000539347 327 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC007068.2-201ENST00000543168 395 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 AC008521.2-201ENST00000591021 259 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.26□□□□□ -1.25
HLA-CQ95604 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 PRR13P7-201ENST00000605538 430 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
HLA-CQ95604 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 AL589743.6-201ENST00000611025 117 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AP005212.3-201ENST00000619964 528 ntBASIC7.26□□□□□ -1.25
HLA-CQ95604 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.26□□□□□ -1.25
HLA-CQ95604 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HLA-CQ95604 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
HLA-CQ95604 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.26□□□□□ -1.25
HLA-CQ95604 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HLA-CQ95604 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HLA-CQ95604 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 RNU6-984P-201ENST00000363236 109 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RNU4-66P-201ENST00000365199 138 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 Y_RNA.373-201ENST00000365600 103 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 MIR188-201ENST00000385034 86 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AC004386.1-201ENST00000393214 761 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 MRPL42P3-201ENST00000401492 326 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AL590635.1-201ENST00000406314 586 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 MIR548F5-201ENST00000408421 86 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AP000534.2-201ENST00000412729 568 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 MRPS21P5-201ENST00000417885 231 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 GEMIN2P2-201ENST00000418195 715 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RPS15AP12-201ENST00000419498 388 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC7.25□□□□□ -1.25
HLA-CQ95604 AL445466.1-201ENST00000448432 357 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 OR7E116P-201ENST00000448529 957 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 CEACAMP4-201ENST00000457676 421 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RN7SL39P-201ENST00000462264 297 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AC006512.1-201ENST00000468816 291 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RN7SL216P-201ENST00000471607 298 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 TXNP6-201ENST00000510190 310 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 RN7SKP40-201ENST00000517211 242 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.25□□□□□ -1.25
HLA-CQ95604 AC023442.1-201ENST00000531247 422 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HLA-CQ95604 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.25□□□□□ -1.25
HLA-CQ95604 AC051619.2-201ENST00000559063 397 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-CQ95604 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.25□□□□□ -1.25
HLA-CQ95604 RN7SL178P-201ENST00000582930 304 ntBASIC7.25□□□□□ -1.25
HLA-CQ95604 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms