Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC007618.1-201ENST00000366455 732 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MIR513B-201ENST00000385136 84 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 RNA5SP487-201ENST00000410186 122 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 Z75741.2-201ENST00000417272 1167 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AL121878.1-201ENST00000418638 859 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 GAPDHP49-201ENST00000421421 961 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 DYNLL1P7-201ENST00000429273 258 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 RPL12P17-201ENST00000432393 498 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC092809.1-201ENST00000441469 474 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC090804.1-201ENST00000448870 490 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 RPL23AP71-201ENST00000470966 469 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 RPL7P41-201ENST00000485823 957 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC112673.1-201ENST00000513168 575 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 RN7SKP147-201ENST00000517154 244 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AP001922.4-201ENST00000526967 290 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC092490.3-201ENST00000545370 572 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC090751.1-201ENST00000566966 267 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MIR4666A-201ENST00000580160 79 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC011840.5-201ENST00000582125 771 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AP001542.2-201ENST00000593141 364 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC124856.1-201ENST00000600819 896 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC243654.2-201ENST00000612843 443 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC079395.3-201ENST00000615161 484 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 AC090527.3-201ENST00000619041 548 ntBASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC33Q8N5R6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 OR9G4-201ENST00000302957 984 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 OR1L6-202ENST00000373684 1044 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 RNU1-74P-201ENST00000384108 171 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AL079342.2-201ENST00000403367 482 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 RNA5SP296-201ENST00000410523 111 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 PCNPP4-201ENST00000414817 517 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 RPL22P18-201ENST00000417197 377 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 HIGD1AP12-201ENST00000427832 281 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC084290.1-201ENST00000434995 374 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 NANOGP2-201ENST00000435391 727 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC006466.1-201ENST00000438721 289 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 EEF1A1P39-201ENST00000440791 250 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC004022.1-201ENST00000447766 1066 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 MTND4LP2-201ENST00000502312 285 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC108043.1-201ENST00000512696 574 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 EIF3KP3-201ENST00000514461 639 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC040958.1-201ENST00000561102 201 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 MIR4480-201ENST00000582492 71 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 VN1R84P-201ENST00000593697 235 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AL020997.3-201ENST00000602843 359 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 NTAN1P1-201ENST00000603150 646 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 AC113368.1-201ENST00000603736 382 ntBASIC5.44□□□□□ -1.54
CCDC33Q8N5R6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms