Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RPL23AP4-201ENST00000427757 463 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 CALM1P2-201ENST00000452941 448 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 EIF2S2P5-201ENST00000457635 968 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RPS27AP17-201ENST00000463344 455 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RAB9BP1-201ENST00000519581 626 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 HMGB1P46-201ENST00000520062 610 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 OR8G5-201ENST00000524943 1041 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL358913.1-201ENST00000554342 121 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL355802.4-201ENST00000607635 548 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC135803.1-201ENST00000608748 565 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 CR589904.2-201ENST00000612533 440 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 MIR6891-201ENST00000618788 93 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC025031.4-201ENST00000621248 3271 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 RNA5SP28-201ENST00000363841 119 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 SNORD96B-201ENST00000386148 79 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 U3.22-201ENST00000391120 215 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 RPL26P37-201ENST00000411983 438 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AL590806.1-201ENST00000415818 853 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AL732292.1-201ENST00000426692 226 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 TMX2P1-201ENST00000436507 708 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 Z95152.1-201ENST00000453556 656 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC025674.1-201ENST00000507074 324 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 STMN1P2-201ENST00000508435 439 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC015795.1-201ENST00000513669 327 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 IGHV3-63-201ENST00000518422 341 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 C1GALT1P3-201ENST00000522049 819 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 GLRXP2-201ENST00000555594 321 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC068020.1-201ENST00000594215 661 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 OR4H6P-202ENST00000603819 340 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC091979.2-201ENST00000607514 214 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AP002360.3-201ENST00000607673 710 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AL121873.1-201ENST00000616013 524 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AL356274.1-201ENST00000617064 410 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC005086.4-201ENST00000623065 213 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC091905.2-201ENST00000623143 306 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 AC010435.1-201ENST00000623353 1177 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 RPL23AP61-201ENST00000623642 466 ntBASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf40Q8IXQ3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms