Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MIR6820-201ENST00000611508 62 ntBASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 CCT8P1-201ENST00000413611 1657 ntBASIC5.18□□□□□ -1.58
SCN4BQ8IWT1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC092079.1-201ENST00000558620 1985 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 CYB5AP4-201ENST00000396692 399 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RPL23AP59-201ENST00000399415 461 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 NCSTNP1-201ENST00000406229 144 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RNA5SP113-201ENST00000410486 84 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 NPM1P40-201ENST00000412758 733 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 COX5BP7-201ENST00000414780 274 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC009302.1-201ENST00000417147 390 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 QRSL1P2-201ENST00000418582 964 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 OSTCP5-201ENST00000425293 453 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC007559.1-201ENST00000428736 355 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 HMGB3P5-201ENST00000428894 612 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 OR2B7P-201ENST00000429302 934 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL136231.1-201ENST00000429407 730 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RPL5P25-201ENST00000441148 775 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL035407.2-201ENST00000454090 378 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AURKAPS2-201ENST00000454983 333 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RPL7P48-201ENST00000461513 746 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RPL21P6-201ENST00000479171 504 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RN7SL809P-201ENST00000482040 297 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC093720.1-201ENST00000505681 714 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 ENPP7P11-201ENST00000505915 627 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 RN7SKP265-201ENST00000516448 223 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 MTATP6P24-201ENST00000576835 677 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC104785.1-201ENST00000603220 588 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC096553.1-201ENST00000605169 829 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC090525.3-201ENST00000605601 189 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL022394.1-201ENST00000606979 292 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC096586.1-201ENST00000610267 561 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 uc_338.9-201ENST00000617424 182 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 FRG1HP-204ENST00000617940 757 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AL121890.3-201ENST00000618494 516 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 FRG1EP-201ENST00000634469 770 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC139713.2-210ENST00000641741 992 ntBASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN4BQ8IWT1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNU6-304P-201ENST00000364855 107 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 SNORA5.1-201ENST00000384275 131 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 DNAJC19P6-201ENST00000401853 280 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms