Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 SNORA74A-201ENST00000364089 198 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RNA5SP428-201ENST00000365129 132 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 U3.32-201ENST00000408116 212 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RN7SKP16-201ENST00000410180 299 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 TCEA1P4-201ENST00000415066 844 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 BX323845.1-201ENST00000432417 179 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 PTMAP6-201ENST00000439110 327 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 BTF3P6-201ENST00000448054 499 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RN7SL329P-201ENST00000467740 299 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RPL21P47-201ENST00000483696 477 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 NIFKP7-201ENST00000503365 834 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC113430.1-201ENST00000506872 718 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC112198.4-201ENST00000515450 351 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 COX6B1P6-201ENST00000522347 255 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 OR8A2P-201ENST00000528631 952 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 MTND5P21-201ENST00000531961 522 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC068339.2-201ENST00000534395 618 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC104072.1-201ENST00000568817 668 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AP005119.2-201ENST00000579735 1105 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 ELOCP28-201ENST00000590044 317 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC067852.4-201ENST00000590314 478 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 BNIP3P31-201ENST00000604515 566 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AL445222.1-201ENST00000607259 628 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AL138955.1-201ENST00000622881 1040 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AC083865.1-201ENST00000636634 831 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 OR51H2P-202ENST00000641424 3046 ntBASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP54Q7Z3B4 AL133412.1-201ENST00000380194 2992 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 HSPA8P19-201ENST00000505359 1517 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL137100.1-201ENST00000556703 1620 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 RNU6-1005P-201ENST00000384519 107 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL078604.1-201ENST00000404609 466 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 SNORA77-201ENST00000408716 125 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC005189.1-201ENST00000431286 310 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MTCO1P43-201ENST00000431831 488 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 RPS29P9-201ENST00000440360 171 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 RPL34P20-201ENST00000442771 351 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC012512.1-201ENST00000446594 718 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 IGHV5-78-201ENST00000450948 295 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 RPL23AP71-201ENST00000470966 469 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 S100A11P1-201ENST00000477525 312 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 OR5H3P-201ENST00000502817 919 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 OR5H4P-201ENST00000510851 923 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 RNA5SP43-201ENST00000516559 110 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AP006245.2-201ENST00000522004 300 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AGGF1P9-201ENST00000561884 913 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MIR4646-201ENST00000580775 63 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 MIR4691-201ENST00000583764 85 ntBASIC4.62□□□□□ -1.67
NUP54Q7Z3B4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms