Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 SNORD74.4-201ENST00000364129 80 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX1Q15475 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 AL121834.1-202ENST00000404494 277 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 Y_RNA.625-201ENST00000411256 107 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 RPA2P2-201ENST00000419698 796 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 RNF19BPX-201ENST00000426224 625 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 AP000949.1-201ENST00000438328 629 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 Z99127.2-201ENST00000441426 334 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX1Q15475 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX1Q15475 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
SIX1Q15475 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX1Q15475 CYCSP53-201ENST00000455540 265 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 PARP4P3-201ENST00000510265 317 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 MYL12AP1-201ENST00000518490 515 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 MTND1P36-201ENST00000522384 936 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX1Q15475 AL109766.1-201ENST00000555080 552 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AC092868.3-201ENST00000560515 784 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 MTND2P13-201ENST00000577438 1039 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 AC008782.1-201ENST00000603386 430 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 RNU6-84P-201ENST00000607737 102 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AC015922.4-201ENST00000612568 690 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 AP002371.2-201ENST00000624450 503 ntBASIC4.48□□□□□ -1.69
SIX1Q15475 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX1Q15475 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX1Q15475 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX1Q15475 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SIX1Q15475 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SIX1Q15475 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 AC010132.2-201ENST00000295493 1043 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 MIR298-201ENST00000401212 88 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC002524.1-201ENST00000411687 547 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX1Q15475 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX1Q15475 ELOCP8-201ENST00000439309 332 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 RPL23AP89-201ENST00000439324 255 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL353748.1-201ENST00000440753 474 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 ELOCP15-201ENST00000442090 332 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX1Q15475 MTND2P25-201ENST00000449028 610 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX1Q15475 RPL5P30-201ENST00000465511 891 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC091544.1-201ENST00000484702 348 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 MTND3P24-201ENST00000506306 329 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 SNORA26.10-201ENST00000516427 141 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX1Q15475 OR8G5-201ENST00000524943 1041 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX1Q15475 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX1Q15475 AC006064.5-201ENST00000541782 248 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL136520.1-202ENST00000555494 763 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC027176.2-201ENST00000559166 746 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SIX1Q15475 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX1Q15475 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX1Q15475 MIMT1-201ENST00000597105 1050 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL592494.3-201ENST00000609485 464 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 AL122125.1-201ENST00000616999 600 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC020978.9-201ENST00000624380 1141 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AC080188.3-201ENST00000624842 748 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL049536.1-201ENST00000625043 744 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX1Q15475 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
SIX1Q15475 AC012618.3-205ENST00000637896 1496 ntBASIC4.47□□□□□ -1.69
SIX1Q15475 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX1Q15475 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SIX1Q15475 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX1Q15475 DDX6P1-205ENST00000441966 1436 ntBASIC4.46□□□□□ -1.69
SIX1Q15475 AC092111.2-201ENST00000611627 1414 ntBASIC4.46□□□□□ -1.69
SIX1Q15475 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.46□□□□□ -1.69
SIX1Q15475 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SIX1Q15475 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.46□□□□□ -1.69
SIX1Q15475 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SIX1Q15475 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX1Q15475 DDX18P6-201ENST00000450119 1997 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 MIR448-201ENST00000362131 111 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 RNA5SP388-201ENST00000362584 119 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX1Q15475 GTF2IP2-201ENST00000424290 697 ntBASIC4.46□□□□□ -1.7
SIX1Q15475 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms