Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 OR52B1P-201ENST00000316506 909 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 RNA5SP52-201ENST00000362448 134 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 RNA5SP105-201ENST00000391123 113 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AL136131.1-201ENST00000406079 803 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 CASKP1-201ENST00000412870 582 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC009302.1-201ENST00000417147 390 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 RPL23AP1-201ENST00000428990 471 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 TPTE2P1-204ENST00000435256 593 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC243772.1-201ENST00000451620 410 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 EIF2S2P5-201ENST00000457635 968 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC037198.2-201ENST00000478845 733 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 RN7SL812P-201ENST00000493791 279 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AK3P4-201ENST00000504283 583 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC147055.1-201ENST00000509261 750 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 NPM1P6-201ENST00000521088 871 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS1Q01581 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AP005119.2-201ENST00000579735 1105 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC020915.5-201ENST00000596836 964 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC115286.1-201ENST00000604298 434 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AL354984.3-201ENST00000604803 325 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC019193.2-201ENST00000610012 634 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AL021997.2-201ENST00000615674 271 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 AC107905.1-201ENST00000616204 426 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 SNX18P1Y-201ENST00000616231 511 ntBASIC4.16□□□□□ -1.74
HMGCS1Q01581 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGCS1Q01581 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGCS1Q01581 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 OR56B2P-202ENST00000641377 2453 ntBASIC4.15□□□□□ -1.74
HMGCS1Q01581 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGCS1Q01581 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HMGCS1Q01581 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.15□□□□□ -1.74
HMGCS1Q01581 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 Y_RNA.62-201ENST00000362840 99 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC019155.1-201ENST00000382242 574 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 MIR129-1-201ENST00000384972 72 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AL583835.1-201ENST00000399570 407 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 RPA2P2-201ENST00000419698 796 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 AL358176.3-201ENST00000420757 454 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC096741.1-201ENST00000472250 846 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC108145.1-201ENST00000503770 153 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 IGLVIV-65-201ENST00000517313 360 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC012409.3-201ENST00000611343 981 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC090971.4-201ENST00000560291 1800 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AC105074.1-201ENST00000623380 3095 ntBASIC4.15□□□□□ -1.75
HMGCS1Q01581 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGCS1Q01581 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGCS1Q01581 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGCS1Q01581 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGCS1Q01581 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms