Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC133473.1-201ENST00000455173 299 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 RPL23AP24-201ENST00000458203 385 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC013356.1-201ENST00000489027 564 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 RPS6P4-201ENST00000494693 758 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.9□□□□□ -1.79
H3F3AP84243 OR51K1P-201ENST00000510214 950 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H3F3AP84243 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.9□□□□□ -1.79
H3F3AP84243 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H3F3AP84243 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.9□□□□□ -1.79
H3F3AP84243 OR5BC1P-201ENST00000529327 739 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.9□□□□□ -1.79
H3F3AP84243 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.9□□□□□ -1.79
H3F3AP84243 AL121834.1-201ENST00000572284 509 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.9□□□□□ -1.79
H3F3AP84243 AC005034.4-201ENST00000603612 899 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
H3F3AP84243 FP325313.1-201ENST00000638228 703 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
H3F3AP84243 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
H3F3AP84243 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
H3F3AP84243 AC006971.1-201ENST00000407916 4486 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 A2MP1-204ENST00000566278 4130 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H3F3AP84243 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.79
H3F3AP84243 AC012020.1-201ENST00000624541 1728 ntBASIC3.9□□□□□ -1.79
H3F3AP84243 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.89□□□□□ -1.79
H3F3AP84243 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
H3F3AP84243 AC010132.2-201ENST00000295493 1043 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 MIR365B-201ENST00000362317 111 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.89□□□□□ -1.79
H3F3AP84243 AC004552.1-201ENST00000419089 348 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.89□□□□□ -1.79
H3F3AP84243 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 IPMKP1-201ENST00000425988 855 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 RPS26P47-201ENST00000427219 348 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 DYNLL1P7-201ENST00000429273 258 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AL512326.1-201ENST00000443050 721 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 RPL35AP15-201ENST00000468042 339 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 RPS26P3-201ENST00000470205 348 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC090543.2-201ENST00000483963 348 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.89□□□□□ -1.79
H3F3AP84243 AC004057.1-201ENST00000485827 348 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 PPM1AP1-201ENST00000502740 1135 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.89□□□□□ -1.79
H3F3AP84243 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.89□□□□□ -1.79
H3F3AP84243 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.89□□□□□ -1.79
H3F3AP84243 OR1AB1P-201ENST00000585564 761 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC015849.6-201ENST00000605454 474 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC025175.1-201ENST00000606482 759 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
H3F3AP84243 AC010435.1-201ENST00000623353 1177 ntBASIC3.89□□□□□ -1.79
H3F3AP84243 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
H3F3AP84243 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H3F3AP84243 AC090971.4-201ENST00000560291 1800 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3F3AP84243 AC097374.1-203ENST00000400783 485 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 VN1R31P-201ENST00000417498 730 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC009480.2-201ENST00000422916 432 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.88□□□□□ -1.79
H3F3AP84243 SKP1P3-201ENST00000429280 487 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 PHBP16-201ENST00000446318 950 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 EIF2S2P2-201ENST00000447161 982 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 UBE2V2P4-201ENST00000447495 259 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC104306.1-201ENST00000449702 371 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 RPL23AP2-201ENST00000471227 466 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 IGLVIV-65-201ENST00000517313 360 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC100770.1-201ENST00000532310 322 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 AL352979.3-201ENST00000553515 247 ntBASIC3.88□□□□□ -1.79
H3F3AP84243 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.88□□□□□ -1.79
H3F3AP84243 AC008638.3-201ENST00000603341 463 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms